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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | B 2 (B) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1A_CVHSA | |
2 | b | F 2 (F) | polymer(polypeptide(L)) [6 aa] | N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE | 3264T 3265T 3266T 3281H 3294Y 3380F 3382N 3383G 3385C 3403H 3404H 3405M 3406E 3408P 3412H 3427D 3429Q 3430T 3432Q (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3iwm_B_2 identity=100.0% |
queryA 3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340 :****************************************************************************************************: 3iwm_B_2 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100 SecStr : THHHHTTEEEEESSS EEEEEEETTEEE TTSS SSSSSS HHHHBSSS TTS EEEETTEEEEEEEEEE SSSEEEEESS TT E: ExpBur :eeeeeeeeebeebeebbbebbbeeeebbbbbbeebbbbbbebbbeeeeeeebebeebbeebeeeebebbeeeeebebebeeeeebbbebebeeebeeebe: Contact : bbb b b queryA 3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440 :****************************************************************************************************: 3iwm_B_2 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200 SecStr :EEE TT EEEEEEETTEEEEEEEE B TTS B TT TT EEE EETTEEEE EEEEE TTS BEEE TT BSSS SSSSS : ExpBur :eebeebeebeebbbbbbeebeeeeeebbebbebebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeeeee: Contact : b bb b bbbb b b b bb b queryA 3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540 :****************************************************************************************************: 3iwm_B_2 201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300 SecStr :HHHHHHHHHHHHTTT TT HHHHHHHHHHTT HHHHHHHHHHHHHTT HHHHHHHHHHHHTT SS BTTBSS HHHHHHH : ExpBur :eeeeeeeeebbeeeeeeeeeeeeebeeeebbebbeeeeeeebeeeebeeeeeeeeeeeeebeeebbeebeebeeebeeeeeeebeeeeeeeeeeeeeeee: queryA 3541:S:3541 :*: 3iwm_B_2 301:S: 301 SecStr : : ExpBur :e: |