Protein Model on 7vlo_B_1_D_1
(TEMPLATE: 
7vlo
)Protein Model on 7vlo_B_1_D_1
(TEMPLATE: 7vlo
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1A_SARS) | B 1 (B) | polymer(polypeptide(L)) [299 aa] | 3C-like proteinase :R1A_SARS | |
| 2 | b | D 1 (B) | non-polymer(4WI) | (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide | 3281H 3288D 3380F 3382N 3383G 3384S 3385C 3403H 3404H 3405M 3406E 3407L 3408P 3412H 3427D 3428R 3429Q 3430T 3432Q (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7vlo_B_1 identity=100.0% |
queryA 3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341
:****************************************************************************************************:
7vlo_B_1 1:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG SSTTBS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT SE:
ExpBur :eeeeeeeebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeebeeeebebeeebeebeeeebebebeeeebbbeeeeeeebbbebbbeeebeeebee:
Contact : b b
queryA 3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441
:****************************************************************************************************:
7vlo_B_1 101:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT: 200
SecStr :EE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSBS B H:
ExpBur :eeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebbbbeebebbeeebeeeeebebb:
Contact : b bbbb bbbbbb b bbbb b
queryA 3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
:***************************************************************************************************:
7vlo_B_1 201:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 299
SecStr :HHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHH :
ExpBur :bbbbbbbbbbbeeeeeebeeeeebebeebbebbeeeebeebeeeeeeebeebbeebebebeebbbbbbebbeeebeebebeeeeebebbbbbebbeeee:
|
[assembly_id:1]
[help]