Protein Model on 2amq_B_1_D_1
(TEMPLATE: 
2amq
)Protein Model on 2amq_B_1_D_1
(TEMPLATE: 2amq
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1A_SARS) | B 1 (B) | polymer(polypeptide(L)) [302 aa] | 3C-like proteinase :R1AB_CVHSA | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [6 aa] | N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE | 3264T 3265T 3266T 3267L 3281H 3289M 3380F 3383G 3384S 3385C 3403H 3404H 3405M 3406E 3408P 3412H 3427D 3428R 3429Q 3430T 3432Q (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2amq_B_1 identity=100.0% |
queryA 3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340
:****************************************************************************************************:
2amq_B_1 6:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 105
SecStr : HHHHTTEEEEEETTEEEEEEEEEEEEEEEGGGG TTTTTS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEEEEEETT E:
ExpBur :eebeeeebebeebebbbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebeeeeeebebebeeeeebbbebebeeebeebbe:
Contact : bbbb b b
queryA 3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440
:****************************************************************************************************:
2amq_B_1 106:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 205
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeebbeb:
Contact : b bbb bbbb b b bbbb b
queryA 3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
:****************************************************************************************************:
2amq_B_1 206:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 305
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHGGGTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHS:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbeebbeeebeeeebeeeeebbbbbbbebbeebb:
queryA 3541:SG:3542
:**:
2amq_B_1 306:SG: 307
SecStr : :
ExpBur :ee:
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[assembly_id:1]
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