Protein Model on 7k0h_B_1_A_1 (TEMPLATE: 7k0h )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1A_SARS) B 1 (B) polymer(polypeptide(L)) [300 aa] Replicase polyprotein 1a :R1A_CVHSA
2 b A 1 (A) polymer(polypeptide(L)) [298 aa] Replicase polyprotein 1a :R1A_CVHSA 3242G 3244R 3245K 3246M 3247A 3248F 3249P 3250S 3251G 3254E 3362P 3363S 3364G 3365V 3366Y 3367Q 3368C 3377K 3378G 3379S 3381L 3526I 3530E 3538R 3539Q 3541S 3542G (identity: 100.0 %/99.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7k0h_B_1 identity=99.7%
queryA      3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341
                :****************************************************************************************************:
7k0h_B_1       9:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 108
SecStr          :         HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  GGGSSS  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  EE:    
ExpBur          :eeeeeeeebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeebeeeebebbeeeeebbbeeeeebebbbebebeeebeebbee:    
Contact         :b bbbbbbbb  b                                                                                       

queryA      3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441
                :***************************************************************************************** **********:
7k0h_B_1     109:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTXQAAGTDTTIT: 208
SecStr          :EE    TT EEEEEEEETTEEEEEEEEEB TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS  -       B H:    
ExpBur          :eeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebbbbeebebeee-eeeeeebebb:    
Contact         :                    bbbbbbb        bbb b                                                            

queryA      3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS:3541
                :****************************************************************************************************:
7k0h_B_1     209:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS: 308
SecStr          :HHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHH   HHHHHHHHHHHHHH  TT  BTTBSS   S  HHHHHHHHT:    
ExpBur          :bbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeebeeebeebbeeeebebeebbbbbbebbeeebeebebeeeeeeebebbbebbebeee:    
Contact         :                                                                                    b   b       bb b

queryA      3542:G:3542
                :*:
7k0h_B_1     309:G: 309
SecStr          : :    
ExpBur          :e:    
Contact         :b                                                                                                   


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