Protein Model on 6xhn_B_1_A_1 (TEMPLATE: 6xhn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1A_SARS) B 1 (B) polymer(polypeptide(L)) [300 aa] 3C-like proteinase :R1A_CVHSA
2 b A 1 (A) polymer(polypeptide(L)) [301 aa] 3C-like proteinase :R1A_CVHSA 3244R 3245K 3246M 3247A 3248F 3249P 3250S 3251G 3254E 3362P 3363S 3364G 3365V 3366Y 3367Q 3368C 3377K 3378G 3379S 3381L 3410G 3538R 3542G 3543V 3544T (identity: 100.0 %/99.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6xhn_B_1 identity=99.3%
queryA      3243:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK:3342
                :****************************************************************************************************:
6xhn_B_1       4:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 103
SecStr          :        HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTT SS  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  EEE:    
ExpBur          :eeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebbeeeeebebebeeeeebbbebebeeebeebbeee:    
Contact         : bbbbbbbb  b                                                                                        

queryA      3343:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL:3442
                :****************************************************************************************************:
6xhn_B_1     104:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 203
SecStr          :E    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B HH:    
ExpBur          :eeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebebbb:    
Contact         :                   bbbbbbb        bbb b                            b                                

queryA      3443:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSG:3542
                :**************************************************************************  ************************:
6xhn_B_1     204:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMXXRTILGSTILEDEFTPFDVVRQCSG: 303
SecStr          :HHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  --  BTTBSS   S  HHHHHHHHT :    
ExpBur          :bbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeebbeebeebbeeeeeebeebbbbbbebbeeee--eebeeeeeeebbbbbebbeeeeee:    
Contact         :                                                                                               b   b

queryA      3543:VT:3544
                :**:
6xhn_B_1     304:VT: 305
SecStr          :  :    
ExpBur          :ee:    
Contact         :bb                                                                                                  


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