Protein Model on 2op9_B_1_A_1
(TEMPLATE: 
2op9
)Protein Model on 2op9_B_1_A_1
(TEMPLATE: 2op9
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1A_SARS) | B 1 (B) | polymer(polypeptide(L)) [299 aa] | Replicase polyprotein 1ab (pp1ab, ORF1AB) 3C-like proteinase (3CL-PRO, 3CLp) :R1AB_CVHSA | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [302 aa] | Replicase polyprotein 1ab (pp1ab, ORF1AB) 3C-like proteinase (3CL-PRO, 3CLp) :R1AB_CVHSA | 3241S 3242G 3244R 3245K 3246M 3247A 3248F 3249P 3250S 3251G 3254E 3362P 3363S 3364G 3365V 3366Y 3367Q 3368C 3377K 3378G 3379S 3380F 3381L 3382N 3406E 3410G 3412H 3525T 3526I 3530E 3539Q (identity: 100.0 %/99.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2op9_B_1 identity=99.3% |
queryA 3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340
:********************************************* ******************************************************:
2op9_B_1 2:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTXEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 101
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG - TTSS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbe-ebeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :bb bbbbbbbb b
queryA 3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440
:****************************************************** *********************************************:
2op9_B_1 102:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYXCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 201
SecStr :EEE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEE - EEEEEEEEEE TTS EEEE TTS BSTT SS S B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbee-ebbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeebbeb:
Contact : bbbbbbb bbbbbb b b b
queryA 3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
:****************************************************************************************************:
2op9_B_1 202:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 301
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebebeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbeebbeeebeeeebbeeeebbbbbbbebbeeee:
Contact : bb b b
queryA 3541:S:3541
:*:
2op9_B_1 302:S: 302
SecStr : :
ExpBur :e:
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[assembly_id:1]
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