[pdbjlvh2]Protein Model on 2amq_A

Protein Model on 2amq_A_1 (TEMPLATE: 2amq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [303 aa]	3C-like proteinase :R1AB_CVHSA

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2amq_A_1 identity=100.0%

queryA      3243:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK:3342
                :****************************************************************************************************:
2amq_A_1       8:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 107
SecStr          :        HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  SSS SS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  SEE:    
ExpBur          :eeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebeeeeeebebebeeeeebbbebebeeebeeebeee:    

queryA      3343:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL:3442
                :****************************************************************************************************:
2amq_A_1     108:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 207
SecStr          :E    TT EEEEEEEETTEEEEEEEEEB TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT  SSSS        B HH:    
ExpBur          :eeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebebbb:    

queryA      3443:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSG:3542
                :****************************************************************************************************:
2amq_A_1     208:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSG: 307
SecStr          :HHHHHHHHHHHHT  TT  S    HHHHHHHHTTTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS   S  HHHHHHHHHT:    
ExpBur          :bbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebbebeebebbbbbebbebeeee:    

queryA      3543:VTF:3545
                :***:
2amq_A_1     308:VTF: 310
SecStr          :   :    
ExpBur          :eee:

Protein Model on 2amq_A_1 (TEMPLATE: 2amq )

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