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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (B) | polymer(polypeptide(L)) [312 aa] | papain-like protease :R1A_SARS | |
2 | b | R 1 (B) | non-polymer(SO4) | SULFATE ION | 1589N 1593K (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7lfv_A_1 identity=100.0% |
queryA 1542:VKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL:1641 :****************************************************************************************************: 7lfv_A_1 3:VKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL: 102 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHHH TTHHHHHHHHHHHHTTS EETTE: ExpBur :eeebebebbbbeeeeeeeebeeeebbeeebeebbbebeebeeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeeb: Contact : b b queryA 1642:TSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTG:1741 :****************************************************************************************************: 7lfv_A_1 103:TSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTG: 202 SecStr :E S TT HHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEET: ExpBur :bbbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbebbbbbbbbbeeeeeeeeebeebbeebbebbebeebebbbbbebeeeeeeebeeee: queryA 1742:VEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT:1841 :****************************************************************************************************: 7lfv_A_1 203:VEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT: 302 SecStr :HHHHEEES S SHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEEETTEEEEEEEEESSSEEEEETTEEEEES EEEEEE: ExpBur :bebbbeeebbbbeebeeebeeeeeeeeebebebbebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbbeeebbebbbeeeeebeebebebb: queryA 1842:DVFYKETSYTTT:1853 :************: 7lfv_A_1 303:DVFYKETSYTTT: 314 SecStr :EEEEE SEEE : ExpBur :bbbbebeeeeee: |