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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase nsp5 :R1AB_SARS | |
2 | b | C 1 (G) | polymer(polypeptide(L)) [6 aa] | 5-mer peptide of inhibitor | 3265T 3281H 3289M 3380F 3381L 3382N 3383G 3384S 3385C 3403H 3404H 3405M 3406E 3412H 3428R 3429Q 3430T 3432Q (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1uk4_A_1 identity=100.0% |
queryA 3243:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK:3342 :****************************************************************************************************: 1uk4_A_1 3:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 102 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG SGGGGS HHHHHTT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT EEE: ExpBur :eeeeebebeebeebbbebbbeebebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebeeeeeebebebeeeeebbbebebeeebeeebeee: Contact : b b b queryA 3343:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL:3442 :****************************************************************************************************: 1uk4_A_1 103:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 202 SecStr :E TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSSS B HH: ExpBur :eeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeeeeeeebeebbb: Contact : bbbbbb bbbb b bbb b queryA 3443:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSG:3542 :****************************************************************************************************: 1uk4_A_1 203:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSG: 302 SecStr :HHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT SSS SS HHHHHHHHTT: ExpBur :bbbbbbbbbbeeeeeebeeeeebebeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebbeeeebebbbbbebbebeeee: queryA 3543:V:3543 :*: 1uk4_A_1 303:V: 303 SecStr : : ExpBur :e: |