[pdbjlvh2]Protein Model on 7ozv_A_1_E

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ozv_A_1_E_1

Protein Model on 7ozv_A_1_E_1 (TEMPLATE: 7ozv )

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [814 aa]	Replicase polyprotein 1ab :R1AB_SARS2
2	b		E 1 (T)	polymer(polyribonucleotide)	Template RNA	496N 500K 501S 507N 541Q 543N 545K 557V 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 689Y 860V 861S 864I 914R 915Y 920F 924M (identity: 100.0 %/97.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ozv_A_1 identity=97.8%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117
                :********************                                                                                :
7ozv_A_1      31:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX:  63
SecStr          : EEEEEEE SS EEEEEEE --------------------------------------------------------------------------------:    
ExpBur          :eebbebeeeeebbbbbebee--------------------------------------------------------------------------------:    

queryA       118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163
                :                                                      **********************************************:
7ozv_A_1      64:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163
SecStr          :------------------------------------------------------   SSBHHHHHHHHHS  TTS HHHHHHHHHTTS  GGGGSSTTSS:    
ExpBur          :------------------------------------------------------eebebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebb:    

queryA       164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263
                :****************************************************************************************************:
7ozv_A_1     164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263
SecStr          : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B  GGGBBTTS B    S EE STT    B HHHHHHHHHHHHHTTTTGGGGBTTS SSS:    
ExpBur          :bbbebeebbebbeebbeebbebbeebbebbeebeeebbebbbbbbbbbbebebebeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeee:    

queryA       264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363
                :**************************************************************************************************  :
7ozv_A_1     264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 363
SecStr          : B    TT    HHHHHHHHHHHSSS  S   SSTTS  SHHHHHHHHHHHHHHTTTS TTTSB  EEEEEETTEEEEEE EEEETTTEEEE S    --:    
ExpBur          :eeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebeeeeeeeebbbbbbbebbbbbebeeeee--:    

queryA       364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463
                :   *************************************************************************************************:
7ozv_A_1     364:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463
SecStr          :--- HHHHHHHHHSHHHHHHHSEE   SS SS EEEESSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHGGGGG     :    
ExpBur          :---eeeeebbbebbbbebeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebeeebbbebbbbbebbbebb:    

queryA       464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563
                :****************************************************************************************************:
7ozv_A_1     464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563
SecStr          :  HHHHHHHHHHHHGGGTT       GGG   S SSS   BTGGGT  HHHHHHHS HHHHHHHHHHHTTS    EEEEEE  S BSSS   EEEE  HH:    
ExpBur          :bbbbbbbbbbbbbbebbeebeebbbebeebeeeeeeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebbbbbb:    
Contact         :                                b   bb     b                                 b b b           b b    

queryA       564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663
                :****************************************************************************************************:
7ozv_A_1     564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663
SecStr          :HHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHHHTT SSEEEEEE  TTHHHH  HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHTT:    
ExpBur          :bbbbbebbbbebbebbeeeeebbbbbebeeeebbbbebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbb:    
Contact         :     b       b  b         b b bb                                                                    

queryA       664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763
                :****************************************************************************************************:
7ozv_A_1     664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763
SecStr          :S EEEETTEEEE  SS  TTSTTHHHHHHHHHHHHHHHHHHHHHHSS STT   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEE:    
ExpBur          :bbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebb:    
Contact         :                  bbbb   b                                                                          

queryA       764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863
                :****************************************************************************************************:
7ozv_A_1     764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863
SecStr          :EEEEHHHHHHTSS  HHHHHHHHHHTS     TTS EEES TTT  S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGGSSSHHHHHHHHHH:    
ExpBur          :bbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebeeeeebbeebeebebbebeeeeeebbbbbbebbebbbbbbbbeeeeebeeeebbeebbebb:    
Contact         :                                                                                                bb  

queryA       864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*********************************             ********************:
7ozv_A_1     864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :STTSGGGGSSSHHHHHHHHHHHHHHHHHHHHH -------------  SGGGSSHHHHHTTSSTT :    
ExpBur          :bbbbbbeebeeeebbebbebbbebbeebeeeee-------------eeeeeeeeeebbeebbeeee:    
Contact         :b                                                 bb    b   b

Protein Model on 7ozv_A_1_E_1 (TEMPLATE: 7ozv )

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