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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [862 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5cu5_B_1 identity=36.0% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * : 5cu5_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDXXXXKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SSEEEEEEEEEEEEETTTTE-----EEEEEEEEEEE S EEEEEEE S EEEEEEEEES ---- EE EEEEEGGGTEEEEEEE-EEE : ExpBur :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebeebbbbbeebebeebebebeee----eeeeebeebeeeebbbbbbebe-eebe: queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 5cu5_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B STTS BEEEEEEEE TT EEEESS- EEEEEE TTS : ExpBur :eeee--------bebbbebebebbeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee: queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 5cu5_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TT EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TT: ExpBur :bbb------bbeebeebbbbbbbbbbbebeeeebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ** **** * * * * ** * * * ** * * *: 5cu5_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEGGGT TTT HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSTT SS : ExpBur :bbbbbbebbbbeeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebebeb-bebbbebbeebbbebbbbbbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 5cu5_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVKE: 536 SecStr : --- SHHHHHTT SSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEE HHHHHHHHH ----------------------------- SHH: ExpBur :b---eeeeebbbbbbebbbbbbbbbbbbbeeeeeeeebbebbbebbeebeeebbebebbbebbeee-----------------------------eebee: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFL--LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNY: 634 : * **** * * * * * ** ** * * * * * ** * *** * *: 5cu5_B_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVXXXXXXXXXXXXRYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYIVHY: 635 SecStr :HHHHHHSS S EEEEEEEETTEEEEEEEE S ------------ EEEEESS EEE SSE-E B SS S EEESGGG SSSEEEE: ExpBur :bbebbbebebbbbbbbeeeeeebebebebbebee------------ebebbbbbbbbbeeeeeeeeeebeeee-eeeebeeeeebbbbbbbbebbbbbbb: queryA 635:DEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTPLFI: 731 : * *** * * * * * * * ** * * * ** * * * ** * * ** * : 5cu5_B_1 636:EGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI-: 734 SecStr :TTTHHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHTTGGGT HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHTTHHHH-: ExpBur :eeebbeebbebbeeebeebeebbbbbbbbbbbbbbbbeebebeebbebbebbeebebbbbbebbbebbbebbebbebeebeebbebbbebbbebbeebb-: queryA 732:HFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAA: 831 : * * ** * ** **** * ** * ** * * *: 5cu5_B_1 735:----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKILYA: 827 SecStr :----HT SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHTS S GGGHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHHHHH: ExpBur :----eebeebe-eeebbebbbbeebbebbbebeeeebeeebeebbeebeeeeeeeebbbbbbebbb--bbbbeeeebbebbbebbeebbbbbbbebbbbb: queryA 832:LACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFG: 931 :* ** * * * * ** * **** ** * ** * * ** ** * * *: 5cu5_B_1 828:LSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ--G: 925 SecStr :HTT S HHHHHHHHHHHHH SSS GGGHHHHHHHHHHSTTTHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHHHTT SHHHHHHHHHHHHHTTSS--S: ExpBur :bbbbeeeebbeebbebbbebeebbbbbbbebbeebbeeeebbebbbebbeeebeebeeebebbbebbbebbebbbbbbbbeebbeebeebbeebeee--b: queryA 932:SGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 :* ** **** * * * : 5cu5_B_1 926:SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr : THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH : ExpBur :eebebbebbbbebeebbebbeebbebbeebbeeeee: |