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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [818 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3mdj_A_1 identity=34.6% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNY---TLSQGH--RVVLRGVGGSQPPDIDKTELVEPTEYLVVH: 165 :** *** * * ** * * * * * ** ** * ** * * * * * * * * : 3mdj_A_1 13:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGXXXRLSEEPLQVLEHPRQEQIALLAP-EPLLVG: 106 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE SS EEEEEEEE --- EEE EEEEETTTTEEEEE S-S TT: ExpBur :beeeebbebbebebbebbbbbebee-----ebbebebebebebeeebebbbbbbeebeeeebbbeee---eeeeeebeeeeeeebebbbbebe-eebeee: queryA 166:LKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPE: 260 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * *: 3mdj_A_1 107:LPYTVV--------IHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIE: 197 SecStr : EEEEE--------EEEEEE BSSSSEEEEEEEE TT EE-EEEEEE TTT HHHHS B STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEE: ExpBur :eebebb--------bebbbebbeeeebbbebebebeeeeee-ebbbbbbbeebbbbbbbbbbbbebbbbbbbbbebeeebebbbbbeeeeeeeeeeeebb: queryA 261:DPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLV: 360 :* * * ****** *** * * * * ** * * * **** * * ****** * *** ******** : 3mdj_A_1 198:D------HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLT: 289 SecStr :E------EE SB GGG EEEE EEEEEE TTS EEEEEE TTTG--GG HHHHHHHHHHHHHHHHHTTS SSSEEEEEEETT S EE TTEE: ExpBur :b------bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--eebebbbebbbebbebbbebbebebebebbbbbbbbebeeebbbbbbbb: queryA 361:TYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPAS: 460 :**** **** ** * * ************** ************* * * * * **** ** : 3mdj_A_1 290:TYRESALLFDAEKSSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSS---XXXXX: 385 SecStr :EEEGGGT TT S HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH GGG THHHH-HHHHHHHHHHHTSS --------: ExpBur :bbebebbbbeeeeeebebebebbbbbbbbbbbbbbbbbbbbeebebbebbbbbbbbbbbbbbeeebeebebeebb-beebbebbeebbeeee--------: queryA 461:EINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIM: 540 : * ** *** * ** ** * ** * ** * ** *** * *: 3mdj_A_1 386:XXXXXXXXXXXXDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMM: 485 SecStr :------------ HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHTT ----------------------------- HHHHH: ExpBur :------------eeeebbbbbbbbbbbbebbeeebbeebbbebbeebeeebbebeebbebbeee-----------------------------eebeebb: queryA 541:NRWTLQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637 :* **** *** ** * * *** * * ** * * * * ** * *** * * : 3mdj_A_1 486:NTWTLQRGFPLITI-TVRGRNVHMKQEHYM----KXXXXAPDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 579 SecStr :HHHHSS S EEEEE-EEETTEEEEEEEE ---- ---- EEEEEEESS SS EEEEE SSE-EEEE SS S EEESGGG SSSEEEESTT: ExpBur :bbbeeeebbbbbbb-eeeeeebebebebbb----e----eeeeeeebbbbbbbbbeeeeeeeeeebeeee-eebebeeebebbbbbbbbebbbbbbbeee: queryA 638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734 : * * * * ** ** ** * * * ** * * * ** * * *** * ** * * * : 3mdj_A_1 580:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 675 SecStr :HHHHHHHHHHH GGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHH----: ExpBur :ebeebbebbeeebeebebebbbbbbbbbbbbbeeeebebeebbebbebbeebeebbbbebbbeebbebbebbbbeeeeebbeebbebbbebbeebb----: queryA 735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALAC: 834 : * ** * * * * * * * * * *** * ** : 3mdj_A_1 676:-DKQTWTD-EGSVSERMLRSELLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCR: 771 SecStr :-HH SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHTTTS S HHHHHHHH--HHHTTSHHHHHHHHHHTTTTTTSHHHHHHHHHHHT: ExpBur :-eebebee-eebbbebebbbebbbbbbebebeebbeebeeebeebeeeeeeeebeebbbbbbb--bbbbeeeebbebbeebbeebeeeeeeebbbebbbb: queryA 835:SKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGT: 934 : * * * * * * * * * * * ** ** * * * *** * : 3mdj_A_1 772:TQNKEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKXXXXSSSIAHMVMGTTNQFSTRTRLEEVKXXXXXXXXX--XXXX: 869 SecStr : S HHHHHHHHHHTTSTTT TTTHHHHHHHHTTSTTTHHHHHHHHHHTHHHHHT ---- SSHHHHHHHHTT HHHHHHH ---------------: ExpBur :beeeebbbebbebbeeeeebeeebbeebbbbbbebeebbebbbebbeeeeeebeee----eeeeeebeebbbebbbeeeebeeee---------------: queryA 935:RALEQALEKTKANIKWVKENKEVVLQWF: 962 : * * ** * * * : 3mdj_A_1 870:XCVQQTIETIEENIGWMDKNFDKIRVWL: 897 SecStr :- THHHHHHHHHHHHHHHHHHHHHHHHT: ExpBur :-eeeebeeebeebbebbeebbeebeebb: |