CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [862 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN | |
2 | b | F 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 450A(N) 567L(M) (identity: 0.0 %/36.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6rqx_A_1 identity=36.6% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169 :** *** * * ** * * * * * ** ** * * * ** * * * * : 6rqx_A_1 49:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEP: 138 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE SS -----EEEEEEEEE TTT EEEE EEEEETTTTEEEEE SS : ExpBur :beeeebbeebebebbbbbbebebee-----eebebbbebebebeeebebbbbbbbeb-----eeeebbbeeeeeeeeeeeebeeeeeeebbbbbbebeee: queryA 170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * ** : 6rqx_A_1 139:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 234 SecStr : TT EEEEEEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B STTS BEEEEEEEE TTSEEEESS EEEEEEEETTEEEE---: ExpBur :beeeeebbbbbebbbebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbebeeebebbbbbeeeeeeeeeeebbbb---: queryA 265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364 : * * ****** *** * * * * ** * * * **** * * ****** * *** ******** ****: 6rqx_A_1 235:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 329 SecStr :---EE SB GGG EEEE EEEEEE TTS EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TTEEEEEG: ExpBur :---ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbeebb--ebbebbbebbbebbebbbeebebebebebbbbbbbbbbbeebbbbbbbbbbbb: queryA 365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464 : **** ** * * ************** ************* * * * * **** **** *** : 6rqx_A_1 330:SALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 425 SecStr :GGT TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGH-HHHHHHHHHHHTSTT SS --- S: ExpBur :ebbbeeeeebebebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-bbebbebbebbbbebbbbbbbe---bee: Contact : b queryA 465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIMNRWT: 544 :**** * ** ** *** * ** ** * ** * ** * ** *** * ** **: 6rqx_A_1 426:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMMNTWT: 525 SecStr :HHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT ----------------------------- HHHHHHHHH: ExpBur :bbebbbbbbebbebbbbbbbbbbeeebeeeebeebbbebbeebeeebbebeebbebbeee-----------------------------eebeebbebbb: queryA 545:LQMGFPVITVDTSTGT---LSQEHFL----LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637 :** *** ** * * *** ** * * ** * * * * ** * *** * * : 6rqx_A_1 526:LQKGFPLITI-TVRGRNVHMKQEHYMKGSXXAPDT--------GYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 615 SecStr :HS S EEEEE-EEETTEEEEEEEE TT -- S-------- EEEEEEETTEEEEEEEEE SSE-EEEE SS S EEESGGG SS EEEETTT: ExpBur :ebebbbbbbb-beeeeebebebbbbeeee--eeee--------eeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbbbebbbbbbbeee: Contact : b queryA 638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734 : * * * * ** ** ** * * * ** * * * ** * * *** * ** * * * : 6rqx_A_1 616:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 711 SecStr :HHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHTTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHHH----: ExpBur :bbeebbebbeeebeebeebbbbbbbbbbbbbbbbeebebeebbbbbbbbeebeebbbbebbbebbeebbbbbbbeebeebbeebbebbbebbeebb----: queryA 735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALAC: 834 : * ** * * * * * * * * * *** * ** : 6rqx_A_1 712:-DKQTWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCR: 807 SecStr :-HH SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S HHHHHHHH--HHHTTSHHHHHHHHHHHTT HHHHHHHHHHHTT: ExpBur :-eebebee-eeebeebbbbbebbbbbbebebeebbeebebebeebeeeeeeeebbbbbbbbbb--bbbbeeeebbebbbeebeebebbbbeebbbebbbb: queryA 835:SKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGT: 934 : * * * * * * * * * * * ** ** ** * * *** * * * ** : 6rqx_A_1 808:TQNKEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQL: 905 SecStr : HHHHHHHHHHHHHTSSS GGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHH TT HHHHHHHHHHHTT SHHHHHHHHHHHHTTGGG--TTT : ExpBur :beeeebbeebbebbeeeeebbbbbbbebbbbbbebeebbebbbebbeebbeebbeebbbbbebbeebbbbbbebbbeeeebeebeebbeebeee--bbeb: queryA 935:RALEQALEKTKANIKWVKENKEVVLQWF: 962 :* * * ** * * * : 6rqx_A_1 906:RCVQQTIETIEENIGWMDKNFDKIRVWL: 933 SecStr :HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbebbbbbbebbbebbeebeeebeebb: |