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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | G 1 (G) | polymer(polypeptide(L)) [885 aa] | Integrin alpha-X :ITAX_HUMAN | |
2 | b | R 1 (R) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 64G(A) 65N (identity: 50.0 %/37.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3k6s_G_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * : 3k6s_G_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98 SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE SS S TTSEEEEETTTTEEEEEETT EE S: ExpBur :bbbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeebeebeebbbbebbbebeeeeebbbbbbebebebe: Contact : bbb queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220 : * ** *** * : 3k6s_G_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110 SecStr :S EE EEEEE----------------------------------------------------------------------------------------: ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------: queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320 : : 3k6s_G_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342 : : 3k6s_G_1 111:----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188 SecStr :----------------------SSS B S ------------------------------------------------------------: ExpBur :----------------------eeeeeeeebeeeeeeeee------------------------------------------------------------: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 3k6s_G_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405 : ** * * ** * **** * ** *** * ***: 3k6s_G_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387 SecStr :------------------------------------- SSSB TTSSEE TT EEEES STTTTBEEEE SSS- EEE SS S BT: ExpBur :-------------------------------------eeeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebebb: queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503 :* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * : 3k6s_G_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484 SecStr :SS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT : ExpBur :eb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeeeee: queryA 504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600 : * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * *: 3k6s_G_1 485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584 SecStr : S SS S SS BTS EEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS TT SSEEEEEEE S SSS EEE: ExpBur :bebeeebebeeeeeebebbebbbebbebbbeeebbbbbbbbbbeeeebbbbbbbbeeeebbeeeeebebbbeeebeebeebbbbbebeeebbebebbbbb: queryA 601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697 :*** * * *** * * ***** ** * ** * * * * * ** * * * * *: 3k6s_G_1 585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683 SecStr :EEESS EEEEEB B EEEEEEESS S STTSS SSS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SSEEEE: ExpBur :bbbeebbbbbbbbbbbebbeeeebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebee: queryA 698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * ** * ** *** * ** *** * * ******* * * ** *** : 3k6s_G_1 684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771 SecStr :EEEE SS EEEEEEEEE S S SS EEEEEEE ------------ SSSSS B SS EEEEE SSS EEEE TT : ExpBur :eeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebbebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebeee: queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887 : * * * * ** * * *** * * * * * * ** ** * * : 3k6s_G_1 772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870 SecStr : S EESS EEEEEEEE SS BSS EEEEEE TTEEEE TT SS EEEEEE SSS-S EEEEEE TTS B TT EEEEEEEEE TT : ExpBur :eebbbeeeeebebebebebeebebebbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeeebe: queryA 888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972 : ** * *** * * ** * * * * * * * * * *** * * * *** : 3k6s_G_1 871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966 SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEE S S SS EEEEEEEE SSS EEEEEEEE STT SB S: ExpBur :beeebebbbebebbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebebebebeeebebbbbbebbbebeeeebbee: queryA 973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066 :* * * * * ** * * * *** * * * * * * * * * * * : 3k6s_G_1 967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062 SecStr : EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEEEEE TT EEEEEE B SGGGGTTT SSE-EEEEEEEEE TTTEEE: ExpBur :bebebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeebb: queryA 1067:LYGSNA:1072 :* * *: 3k6s_G_1 1063:LPGQEA:1068 SecStr :SSS : ExpBur :eeeeee: |