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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | G 1 (G) | polymer(polypeptide(L)) [883 aa] | Integrin alpha-X :ITAX_HUMAN | |
2 | b | HB 1 (G) | non-polymer(CA) | CALCIUM ION | 590D 592E(T) 594D 596L 597A(V) 598D (identity: 66.7 %/37.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5es4_G_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * : 5es4_G_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98 SecStr : B SSS EEEE SSS--TTSEEEEETTTEEEEE TT EEETTEEB EEEE TTTS EEE TTSBS BTSEEEEETTTTEEEEEEEEEEEE S: ExpBur :bbbbeeeebebeeebeb--bbbebbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeebeeeeeeebeebbbbebbbeeeeeebbbbbbbbbebebe: queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220 : * ** *** * : 5es4_G_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110 SecStr :S EEEEEEEEEE----------------------------------------------------------------------------------------: ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------: queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320 : : 5es4_G_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342 : : 5es4_G_1 111:----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188 SecStr :---------------------- SSS EEESSS ------------------------------------------------------------: ExpBur :----------------------beeeeeeebeeeeeebee------------------------------------------------------------: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 5es4_G_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405 : ** * * ** * **** * ** *** * ***: 5es4_G_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387 SecStr :------------------------------------- SSSS TTSEEE SSS EEE SSHHHHT EEE TTS- EEE TT GGGTT TT: ExpBur :-------------------------------------eeeeeeebbbbebbbbbeebbbbbbbbbebebbbbbbbeeee-eeeebebeeeeeebeebebb: queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503 :* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * : 5es4_G_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484 SecStr :SE-EEEEEETTEEEEEEEETTGGGTBEEEEEE--EETTEEEEEEEEE SSTT BTS EEEE SS SSS EEEEE TT B SSEEE EEEEE SSS : ExpBur :eb-beebeeeeeebbbbbbbebeebbbbbbbb--eeeeebeeebebebeeeebebbbbbbbbbbeeeebbbbbbbbbbeeeeeeebbbbbbbbeeeeeee: queryA 504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600 : * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * *: 5es4_G_1 485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584 SecStr : EEE TTEEEEEETS EEEEE SSSSSS EEEEE TTHHHHTBEEEEEEEETTTEE SS S EEEHHHH TT SBTSEEEEEE SSSSSS EEE: ExpBur :beeeeebbbeeebeebbbbebbbebeebbbeebbbbbbbbbbbeeeebbbbbbbbeeeebbeeeeebbbbbeeebeebeebbebbbbebebbebebebbb: Contact : b b b bbb queryA 601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697 :*** * * *** * * ***** ** * ** * * * * * ** * * * * *: 5es4_G_1 585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683 SecStr :EEETTEEEEEEB EE EEEEEEEESSSB HHHHS SSTTS - EEEEEEEEEEE S SS HHHHS EEEEEEEESTTSS EETTTSSSEE : ExpBur :bbbebbbbbbbbbbbbbbbeebebeeeebeeebbeeeeeeeee-eeebebbbbbebeeeeeebeeebbeebebebebbbbeeeeeebbebeeeeeeebee: queryA 698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * ** * ** *** * ** *** * * ******* * * ** *** : 5es4_G_1 684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771 SecStr :EEE SS EEEEEEEEE S S SSS EEEEEEEEE------------ GGG EE TTS EEEEEE B S TT EEEEEE SS : ExpBur :ebebbeeeeeeebebebebebeebeebbebebbbeb------------ebeebeeeebbebbbbeeeeeebebebbbeeeeeeeeeeeeebbbebebeee: queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887 : * * * * ** * * *** * * * * * * ** ** * * : 5es4_G_1 772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870 SecStr : SEEETTB EEEEEEEEEE SS BSS EEEEEEETTEEE TT SS EEEEEEE SSS-SEEEEEEEE SS B TT EEEEEEEEEE SS : ExpBur :eebbbeeeeebebebebebebeebbbbebebebeebbebeebeeeeeeeeebebebebeeeeeeee-eeebbebebbeeebeeeeebebbbbbebeeebe: queryA 888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972 : ** * *** * * ** * * * * * * * * * *** * * * *** : 5es4_G_1 871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966 SecStr : SEEEEEEEEE TT ---- SSS EEEEEEEEEEE EEEEE S TT SS EEEEEEEEEEEE SSS EEEEEEEEEEETTEESEEE: ExpBur :beeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeebeeeeeebebeeeeeeeeeebebebbbbbebebebebbbbbbbbeebeeeebbee: queryA 973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066 :* * * * * ** * * * *** * * * * * * * * * * * : 5es4_G_1 967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062 SecStr :EEEE S--SS EEEEEE HHHHHHSS -EE TTTSEEEEEEEEES TT EEEEEEEEEEE GGGGTTT S -EEEEEEEEE TTTEEE: ExpBur :bebebe--eeeeeeeeeeeeeeeeeebeeebeeee-ebebebbbbbebebbbeebeeeeebbbbbebebbbebbeebeeeeb-bbbbbbebebeeeeeeb: queryA 1067:LYGSNA:1072 :* * *: 5es4_G_1 1063:LPGQEA:1068 SecStr : SSTTG: ExpBur :eeeeee: |