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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
2 | b | ZA 1 (E) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 693H(N) (identity: 0.0 %/37.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5es4_E_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * : 5es4_E_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98 SecStr : B SSS EEEE STT--TTSEEEEETTTEEEEEETT SBTTB BEEEEEETTTTEEEE TT S BTSEEEEEETTEEEEEEEEEEEEEET: ExpBur :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbeeeeebeebeeeeeeebeebbbbebbbebeeeeebbbbbbbbebebe: queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220 : * ** *** * : 5es4_E_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110 SecStr :TEEEEEEEEEEE----------------------------------------------------------------------------------------: ExpBur :eeebebbbbbbb----------------------------------------------------------------------------------------: queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320 : : 5es4_E_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342 : : 5es4_E_1 111:----------------------GPTQLTQRLPVSRQECPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188 SecStr :---------------------- SSS EEESSS -----------------------------------------------------------: ExpBur :----------------------beeeeeeebbeeebeeeee-----------------------------------------------------------: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 5es4_E_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405 : ** * * ** * **** * ** *** * ***: 5es4_E_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387 SecStr :------------------------------------- SSS TTSSEE TT EEEESSHHHHT EEEE TTS- EEE TT GGGTTS TT: ExpBur :-------------------------------------eeeeeeebebbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebbbb: queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503 :* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * : 5es4_E_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484 SecStr :SE-EEEEESSSSEEEEEEETTGGGT EEEEEE--EETTEEEEEEEEE SSTT TTSEEEEE SS SSS EEEEE TT EETTEEE EEEEE STT : ExpBur :eb-bbbbeeeeebbbbbbbbebeeebbbbbbb--eeeeebeeebebebeeeebebbbbbbbbbbeeeebbbbbbbbbbebeeeeebbbbbbbbbbeeeee: queryA 504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600 : * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * *: 5es4_E_1 485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584 SecStr : EEE SSEEEEEETSEEEEEE SSSSS EEEEEETTHHHHTBEEEEEEEETTTEE SS SEEEEHHHH TT SBTSEEEEEE SSSSSS EEE: ExpBur :beeeeebeeeeebeebebbebbbebeebbbeebbbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebbbbbeeeeeebeebbbbbbbebebbebebebbb: queryA 601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697 :*** * * *** * * ***** ** * ** * * * * * ** * * * * *: 5es4_E_1 585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683 SecStr :EEETTEEEEEEB EE EEEEEEEESSSB TTTT SSSS S- EEEEEEEEEEE S TT STTTS EEEEEEEEESTT SS S EETTTTBSEEEE: ExpBur :bbbeebbbbbbbbbbbebbeeeebeeeebeeebbeeeeeeeee-ebebebbbbbebeeebeebeeebbeebebebebbbbeeeeeebbebeeeeeeebee: Contact : b queryA 698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * ** * ** *** * ** *** * * ******* * * ** *** : 5es4_E_1 684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771 SecStr :EEEE SS EEEEEEEEE S S SS EEEEEEEE ------------ GGG EE TTS EEEEE B S SS EEEEEE TT : ExpBur :eeebbeeeeebebebbbebebeeeeebbebebebeb------------ebeebeeeebbebebbeeeeeeeebebbbebeeeeeeeeebebbbebebeee: queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887 : * * * * ** * * *** * * * * * * ** ** * * : 5es4_E_1 772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870 SecStr : SEEETTB EEEEEEEEEESSS BSS EEEEEEETTEEEE SS SSS EEEEEEE SSS-SEEEEEEEE SS B TT EEEEEEEEEE TT : ExpBur :eebbbeeeeebebebebebebeebebbbbbbebbeebeeeeeeeeeeeeeebebebebeeeeeeee-eeeebebebeeeebebeeeeebebbbebeeebe: queryA 888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972 : ** * *** * * ** * * * * * * * * * *** * * * *** : 5es4_E_1 871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966 SecStr : SEEEEEEEEE TT ---- SSS EEEEEEEEEEE EEEEE S S SS S EEEEEEEEEEEE SS EEEEEEEEEEEEETTEESEEE: ExpBur :beeebebbbebbbbbee----eeeeeeeeeeeeebebbbbbbbeebeeeeeebebeeeeeeeeeebebebebbbebeeebebbbbbebbbebeeeebbee: queryA 973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066 :* * * * * ** * * * *** * * * * * * * * * * * : 5es4_E_1 967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062 SecStr :EEEE --SS EEEEE HHHHTTSS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESGGGGGG SS -EEEEEEEEE TTTEEE: ExpBur :beeebe--eeeeeeeeeeeeeeeeeebeeebeeee-ebeeebbbbbbbebbbeebbbeebbbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeeb: queryA 1067:LYGSNA:1072 :* * *: 5es4_E_1 1063:LPGQEA:1068 SecStr : SSTTG: ExpBur :eeeeee: |