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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
2 | b | KA 1 (E) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 691G(T) 693H(N) 694E(R) (identity: 0.0 %/37.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3k6s_E_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * : 3k6s_E_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98 SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE SSS S TTSEEEEETTTTEEEEEETT EE S: ExpBur :bbbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe: queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220 : * ** *** * : 3k6s_E_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110 SecStr :S EE EEEEE----------------------------------------------------------------------------------------: ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------: queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320 : : 3k6s_E_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 321:KDLFTELQKKIYVIEGTSKQDLT-----------------------------------------------------------------------------: 343 : : 3k6s_E_1 111:-----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 187 SecStr :-----------------------SSS B S -----------------------------------------------------------: ExpBur :-----------------------eeeeeeeebeeeeeeeee-----------------------------------------------------------: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 3k6s_E_1 188:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 287 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 344:---------------------------------------SFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYL: 404 : ** * * ** * **** * ** *** * **: 3k6s_E_1 288:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYL: 386 SecStr :--------------------------------------- SSSB TTSSEE TT EEEES STTTTBEEEE SSS- EEE SS S B: ExpBur :---------------------------------------eeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebeb: queryA 405:GYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQL: 502 :** * * * ******* * * * * ********* ** **** ** * * ***** * *** * * : 3k6s_E_1 387:GYS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWR: 483 SecStr :TSS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT: ExpBur :beb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeeee: queryA 503:GFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADV: 599 : * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * : 3k6s_E_1 484:RWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDL: 583 SecStr : S SS S SS BTS EEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS TT SSEEEEEEE S SSS EE: ExpBur :ebebeeebebeeeeeebebbebbbebeebbbeeebbbbbbbbbbeeeebbbbbbbbeeeebbeeeeebebbbeeebeebeebbbbbebeeebbebebbbb: queryA 600:AVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LR: 696 :**** * * *** * * ***** ** * ** * * * * * ** * * * * : 3k6s_E_1 584:AVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLS: 682 SecStr :EEEESS EEEEEB B EEEEEEESS S STTSS SSS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SSEEE: ExpBur :bbbbeebbbbbbbbbbbebbeebebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebe: Contact : b bb queryA 697:RNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPAR: 789 :* * * * ** * ** *** * ** *** * * ******* * * ** *** : 3k6s_E_1 683:RVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPG: 770 SecStr :EEEEE SS EEEEEEEEE S S SS EEEEEEE ------------ SSSSS B SS EEEEE SSS EEEE TT: ExpBur :eeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebee: queryA 790:SRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNS: 886 : * * * * ** * * *** * * * * * * ** ** * * : 3k6s_E_1 771:LKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKA: 869 SecStr : S EESS EEEEEEEE SS BSS EEEEEE TTEEEE SS SS EEEEEE SSS-S EEEEEE TTS B TT EEEEEEEEE TT : ExpBur :eeebbbeeeeebebebebebeeeebbbbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeeeb: queryA 887:SWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV--: 972 : ** * *** * * ** * * * * * * * * * *** * * * *** : 3k6s_E_1 870:VLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWM: 965 SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEE S S SS EEEEEEEE SSS EEEEEEEE STT SB : ExpBur :ebeeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebebebebeeebebbbbbebbbebeeeebbe: queryA 973:-VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHF:1065 : * * * * * ** * * * *** * * * * * * * * * * * : 3k6s_E_1 966:DVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYS:1061 SecStr :S EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEEEEE TT EEEEEE B SGGGGTTT SSE-EEEEEEEEE TTTEE: ExpBur :ebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbbbbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeb: queryA 1066:HLYGSNA:1072 : * * *: 3k6s_E_1 1062:QLPGQEA:1068 SecStr :ESSS : ExpBur :beeeeee: |