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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | E 8 (A) | polymer(polypeptide(L)) [590 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | F 8 (B) | polymer(polypeptide(L)) [448 aa] | Integrin beta-6 :ITB6_HUMAN | 428Q(R) 429H(T) 456I(M) 457G(A) 484L 486Y(M) 489Q 490R(E) 516Y(F) (identity: 22.2 %/32.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5neu_E_8 identity=32.4% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494 :**** * ** ** * * * * * * *** * * ****** * * *: 5neu_E_8 219:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 313 SecStr : TTSSEE S SSSSSS EEEEESS TTTT EEEEE ----TTT EEEE SSSSS TTSS EE SSSSS EEE-E TT EE SSSS EE EE: ExpBur :ebbbbbbbbbbeeeeebbbbbbbbebeeebbbbbbbb----beebeeeeebebeeeebebbebbbbbbbbeeeebbbb-bbbbebeeeeeeeeeebbbbb: Contact : bb bb b b bbbb queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGR: 583 : * * * * *** ** * * ** * * ** * ******* ** *** ** ** ** : 5neu_E_8 314:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSCPPSFGY: 404 SecStr :EEEE SSS EEEEEE SSS-- TTSEEEEEESSS SSS EEEEEESS SGGG EEEEE B SSSB SS S ------- S SSS S : ExpBur :bbbbbeeebebeeeebebeeee--bebbbbbbebbebbeeeeebbbbbbbebbeeeebbbbbbbbeeebbbeeeeeebeb-------eeeeeeeebbbbe: Contact : b bb queryA 584:SIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDG: 679 :* * * * * *** * *** * ** * * * * * * ** : 5neu_E_8 405:SMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDK: 499 SecStr :B SS SSSSS EEEEETTTTEEEEE B EEEEE EEEE SS TT S TTSS EEEEEEEEEEE SSS S----- EEEEEEEE S: ExpBur :bbebeeebbebebbbbbbbbbbbbbbbbbbbbbbbebeeebebeeeebebeeeeeeeeeeeeebbbbebebbbebebeeebee-----ebbbebebbbbe: Contact : b queryA 680:HR-TRRRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733 : ** ** * * * * * * ** *: 5neu_E_8 500:LKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 559 SecStr : SEEESSS SSSEEEEEEE BSS EEEEEEEEE TTT SSS EEEEEEE: ExpBur :eeeeeebbbbbeeeeeeeeeebebbeeeeeeeeebebbbeeeeebeeeebebbbbbebeb: |