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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [452 aa] | Integrin alpha-IIb :ITAB_HUMAN | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [440 aa] | Integrin beta-3 :ITB3_HUMAN | 400R(F) 401A(D) 403Y 406Y 426R(T) 429H(W) 456I(M) 457G(A) 459Y 462G(H) 483P 484L 487G(M) 516Y 520R 545L(Y) 583R(F) (identity: 41.2 %/37.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1tye_E_1 identity=37.2% |
queryA 396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491 : ** ** ** * * *** * * * **** ** ** ** **** * * * : 1tye_E_1 227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRAEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319 SecStr : GGGTT TTSEEEEE SS TTS EEEEEETTHHHHT EEEEE T-----T EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT- EEEETT: ExpBur :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeebbbbbbbee-----ebeeeeebebebeebebbbbbbbbbbbeeeeebbb-bbbbe-beeeeee: Contact : bb b b b bb bb b b bb b queryA 492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578 : *** ** * * * **** ** * * ** * ** ** * * * * ** *** * : 1tye_E_1 320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415 SecStr :TEEEE EEEEE SSS S SEE-EE STT-- TTSEEEE TTSSSS EEEEETT STTSS EEEEE EETTEE SS SEEEE- S TT : ExpBur :eeebebbbbbbbbbeeeeeebeeeebe-bebeeee--bebbbbbbebbbbbeeeeebbbbbbbebbeeeebbbbbbbbbeebbeeeeebebe-bebeeeb: Contact : b b b b b queryA 579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614 : ** * * * * * *** * * *: 1tye_E_1 416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP: 452 SecStr : -TTSEEEEEE SS SSS EEEEEETTTTEEEEE S : ExpBur :b-bbebbebeeebeeeeebbbbbbbeeebebbbbbbee: Contact : b b |