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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [595 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | UA 1 (C) | non-polymer(CA) | CALCIUM ION | 412P(D) 413S(N) 415Q(D) 417T(I) 419L(D) 437Q(D) (identity: 0.0 %/31.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6om1_C_1 identity=31.7% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494 :**** * ** ** * * * * * * *** * * ****** * * *: 6om1_C_1 221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315 SecStr : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT EEE TTS EEE EE: ExpBur :ebbebbbebebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebeeeebbbbbbbbbbbbbeeeebbbb-bbbbebeeebeeeeeebbbbb: Contact : b b b b b b queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582 : * * * * *** ** * * ** * * ** * ******* ** *** ** ** **: 6om1_C_1 316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 406 SecStr :EEEEE TTSSEEEEEEE SSTT--S TTSEEEEEESTT SSS EEEEEETT SGGG EEEEEEEETTEE SS SEEEE ------- SSS TT: ExpBur :bbbbbeeeeebeeeebebeeee--bebbbbbbebebbbeeeeebbbbbbbbbeeeebbbbbbbbbeeebbeeebebebeb-------ebeeeeeeebbbb: queryA 583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVANLTYTLQLDGH: 680 : * * * * * *** * *** * ** * * * * * * : 6om1_C_1 407:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPXTALKVSCFNVRFCLKADG-----KGVLPRKLNFQVELLLD: 501 SecStr :SEEEEEE TTSSSS EEEEEEGGGTEEEEE B EEEEEEEEEEESSEE TTT EE - EE EEEEEEEEEEE -----SSS SEEEEEEEEEE : ExpBur :ebbebebebbebebbbbbbbbbbbbebbbbbbbbbbebebbbebeeeebeeeeeebebe-eeeebbbbebebbbebeb-----eeebeeebebebbbebb: queryA 681:RTR-----RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733 : ** ** * * * * * * ** *: 6om1_C_1 502:KLKXXXAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 564 SecStr : --- EEETTT SSEEEEEEEEEBSS EEEEEEEEE GGG SS EEEEEEEEE: ExpBur :eee---eeebbbbbeeeeeeeeeebebeeeeeeeeeebebbbeeeeebebbeeebbbbbebeb: |