CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [453 aa] | Integrin alpha-IIb :ITA2B_HUMAN | |
2 | b | DA 1 (C) | non-polymer(CA) | CALCIUM ION | 468D 470D(N) 472D 474E(R) 476E(D) (identity: 40.0 %/38.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5hdb_C_1 identity=38.0% |
queryA 396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491 : ** ** ** * * *** * * * * **** ** ** ** **** * * * : 5hdb_C_1 227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319 SecStr : GGGTT TTSEEEEE SS SSS EEEEEETTHHHHT EEEEE T-----T EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT- EEEETT: ExpBur :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeeebbbbbbbb-----ebeeebbbebeeeebbbbbbbbbbbbbeeeeebbb-bbbbe-beeeeee: Contact : b b b b b queryA 492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578 : *** ** * * * **** ** * * ** * ** ** * * * * ** *** * : 5hdb_C_1 320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415 SecStr :TEEEE BEEEEE STT S SEE-EE STT-- BTSEEEEEE SS SSS EEEEEETT STTSSBEEEEE EETTEE SS SEEEE- SS TT : ExpBur :eeebbbbbbbbbebeeeeeebeeeeee-bbbeeee--bebbbbbbebbebbeeeeebbbbbbbebbeebebbbbbbbbeeebbeeeeebebe-bebeeeb: queryA 579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPV: 615 : ** * * * * * *** * * **: 5hdb_C_1 416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPV: 453 SecStr : -BTSEEEEEE SSSSSS EEEEEETTTTEEEEE B : ExpBur :b-bbebbebeebbeeeebbbbbbbbbebbebbbbbbeee: |