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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [885 aa] | Integrin alpha-X :ITAX_HUMAN | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [674 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 97M(L) 114G(T) 116S(H) 120D(G) 121Q(R) 122N 123T(M) 125L 349L(M) 351S(Q) 354I(F) 373W 401A(D) 403Y 406Y 426R 429H 455Q 456I 457G 459Y 484L(H) 486Y 487G(E) 490R 507V(D) 518L(W) 520R 564Q(S) 680H(G) 681R 722I(V) 723S(T) 728S(R) 761E(D) 830R 831K(Y) 836K(Q) 843V(L) 844S(T) 865S(H) 866P(L) 867I 869K(R) 924N(Y) 926L(V) 928Q(S) 931E 935L(K) 936Y 937V(L) 1071N(E) (identity: 35.2 %/37.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3k6s_C_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * : 3k6s_C_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98 SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE SS S TTSEEEEETTTTEEEEEETT EE S: ExpBur :ebbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe: Contact : b b b b b b queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220 : * ** *** * : 3k6s_C_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110 SecStr :S EE EEEEE----------------------------------------------------------------------------------------: ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------: Contact :bbb b queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320 : : 3k6s_C_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342 : : 3k6s_C_1 111:----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188 SecStr :----------------------SSS B S ------------------------------------------------------------: ExpBur :----------------------eeeeeeeebeeeeeeeee------------------------------------------------------------: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 3k6s_C_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405 : ** * * ** * **** * ** *** * ***: 3k6s_C_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387 SecStr :------------------------------------- SSSB TTSSEE TT EEEES STTTTBEEEE SSS- EEE SS S BT: ExpBur :-------------------------------------eeeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebebb: Contact : b b b b b b queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503 :* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * : 3k6s_C_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484 SecStr :SS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT : ExpBur :eb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebebeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbbebeeb: Contact :b b b bbb b b bb b queryA 504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600 : * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * *: 3k6s_C_1 485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584 SecStr : S SS S SS BTS EEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS TT SSEEEEEEE S SSS EEE: ExpBur :bebeeebebeeeeeebebbebbbebbebbbeeebbbbbbbbbbeeeebbbbbbbbeebeebeeeeebebbbeeebeebeebbbbbebeeebbeeebbbbb: Contact : b b b b queryA 601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697 :*** * * *** * * ***** ** * ** * * * * * ** * * * * *: 3k6s_C_1 585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683 SecStr :EEESS EEEEEB B EEEEEEESS S STTTB TT SS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SSEEEE: ExpBur :bbbeebbbbbbbbbbbebeeebebeeeebeeebbebeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebee: Contact : bb queryA 698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * ** * ** *** * ** *** * * ******* * * ** *** : 3k6s_C_1 684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771 SecStr :EEEE SS EEEEEEEEE SB S SS EEEEEEE ------------ SSSSS B SS EEEEE SSS EEEE TT : ExpBur :eeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebebbeeeeeeeebebbbeeebeeeeeeeeebbbebebeee: Contact : bb b b b queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887 : * * * * ** * * *** * * * * * * ** ** * * : 3k6s_C_1 772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870 SecStr : S EESS EEEEEEEE SS BSS EEEEEE TTEEEE TT SS EEEEEE SSS-S EEEEEE TTS B TT EEEEEEEEE TT : ExpBur :eebbbeeeeebebebebebeebebebbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebbbbbebeeebe: Contact : bb b bbb bbb b queryA 888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972 : ** * *** * * ** * * * * * * * * * *** * * * *** : 3k6s_C_1 871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966 SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEE S S SS EEEEEEEE SSS EEEEEEEE STT SB S: ExpBur :beeebebbbebebbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebbbebebeeebebbbbbebbbebeeeebbee: Contact : b b b b bbb b queryA 973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066 :* * * * * ** * * * *** * * * * * * * * * * * : 3k6s_C_1 967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062 SecStr : EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEEEEE TT EEEEEE B SGGGGTTT SSE-EEEEEEEEE TTTEEE: ExpBur :beeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeebbbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeebb: queryA 1067:LYGSNA:1072 :* * *: 3k6s_C_1 1063:LPGQEA:1068 SecStr :SSS : ExpBur :eeeeee: Contact : b |