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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(ITAL_HUMAN) | B 1 (A) | polymer(polypeptide(L)) [909 aa] | Integrin alpha-E :ITAE_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8zjf_B_1 identity=34.0% |
queryA 152:KGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQ--FAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREEL: 249 : *** * * ** ** * ** ** **** * * * * * * * : 8zjf_B_1 197:EAGTEIAIILDGSGSIDPPDFQRAKDFISNMMRNFYEKCFECNFALVQYGGVIQTEFDLRDSQDVMASLARVQNITQVGSVTKTASAMQHVLDSIFTSSH: 296 SecStr : EEEEEEEE TTS HHHHHHHHHHHHHHHHHHHHH SSEEEEEEEESSS EE TTGGGSHHHHHHHHHT HHHHHHHHHHHTSSGGG: ExpBur :eeebbbbbbbbbbeebeeebbeebbebbbebbeebbeebeebbbbbbbbbbeeeebbebeebeeeeebbeebeebeeeeebbebbbbbeebbeebbeeeb: queryA 250:GARPDATKVLIIITDG-------EATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDL: 342 :* * * ** *** * * * ** * * * ** * * * * * *** *: 8zjf_B_1 297:GSRRKASKVMVVLTDGGIFEDPLNLTTVINSPKMQGVERFAIGVGEEFKSARTARELNLIASDPDETHAFKVTNYMALDGLLSKLRYNIISMEGTVGDAL: 396 SecStr :T TTSEEEEEEE SS S SS HHHHHS GGGSS EEEEE SHHHHHSTHHHHHHHHS SSSSSEE S GGGHHHHHHHHHHTT SS : ExpBur :ebbeebebbbbbbbbeeeeebeeebeebeeeeebeeeebbbbbbbeebeeeebeebbeebbeeeeeebbbebeebeebeebbeebeeebbeeeeeeeeee: queryA 343:TSFNMELSSSGISAD-LSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEV----RAGYLGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQ: 437 : * * ** * ***** ** ** * * **** * * * * ***** * * * *: 8zjf_B_1 397:---HYQLAQIGFSAQILDERQVLLGAVGAFDWSGGALLYDTRSRRGRFLNQTAAAAADAEAAQYSYLGYAVAVLHKTCSLSYIA-GAPRYKHHGAVFELQ: 492 SecStr :---SSTT EEEEEEE SSSEEEEEETTHHHHTB EEEEETTTTEEEEE SSSHHHHHTTT BTSEEEEEE SS EEEEE-EETTGGGTBEEEEEE: ExpBur :---ebeebbbbebbebbeeeebbbbbbbbeeebbbbbbbbbeeeebbbbeeeeeeeeeeeebeebebbebbbbbeeeeeebbbb-bbbebeeebbbbbbe: queryA 438:EPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQ--RRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDG: 535 : * * * * ***** *** ** * ** * ** ** *** * * * * ** *** * * * * : 8zjf_B_1 493:KE--GREASFLPVLEGEQMGSYFGSELCPVDIDMDGSTDFLLVAAPFYHVHGEEGRVYVYRLSEQDGSFSLARILSGHPGFTNARFGFAMAAMGDLSQDK: 590 SecStr :EE--TTEEEEEEEEE STTS BTSEEEEE TT SSS EEEEEETT SSSEEEEEEEEEE TTT EEEEEEE TT SEEEETSEEEE SSSSS: ExpBur :ee--eeebbbeeebebeeeebbbbbebbebbbeeeebbebbbbbbbebeeeeebbebbbbebbeeebebeeeeebeeeeeeeebebbebbbebeebbeee: queryA 536:LVDVAVGAPLEEQGA--------VYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPA: 627 :* *** ***** ** *** ** *** ***** * * * ** * * * ****** ** * * ***** * * * : 8zjf_B_1 591:LTDVAIGAPLEGFGADDGASFGSVYIYNGHWDGLSASPSQRIRASTVAPGLQYFGMSMAGGFDISGDGLADITVGTLGQAVVFRSRPVVRLKVSMAFTPS: 690 SecStr :S EEEEETTTTTT GGG EEEEE BTTBS SS SEEEEGGGT SS STTSEEEEEE SSSSS EEEEE SB EEEEEE EE EE SSS: ExpBur :bbbbbbbbbbbeeeeeeeebbbbbbbbbbeeebbbeeebbebebeebbebbeebbbbbbbebebeeeebbbbbbbbebbbbbbbbbbbbebebebebeee: queryA 628:EIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQ-GRLVANLTYTLQLDGHRTRRRGLFPGGRHEL--RRNIAVTTSMSCTDFSF---HFPVCVQDL: 721 : * ** ** * * * * * ** * *** * * * * * * * * : 8zjf_B_1 691:ALPI-----------GFNGVVNVRLCFEISSVTTASESGLREALLNFTLDVDVGKQRRRLQCSDVRSCLGCLREWS-SGSQLCEDLLLMPTEGELCEEDC: 778 SecStr :SB T-----------T S EEE EEEE SSS TTSTTT EEEE EEES S SS S EESSGGGTT EEEE -SSSEEE EEEE STT TTS : ExpBur :ebee-----------ebeeebebebbbeeebebeeeebbbeebebbbebebbeeeeeebbebeeeeebeebeeebe-eeeebeeebebbebeebeeeeeb: queryA 722:ISPINVSLNFSLWEEEGTPRDQRAQGKDIPPIL-RPSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSNLEEDAYWVQLD: 820 : * * * ** * *** * * ** * * * * * * * * ** * : 8zjf_B_1 779:FSNASVKVSYQLQTPEG-------QTDHPQPILDRYTEPFAIFQLPYEKACKNKLFCVAELQLATTVSQ-QELVVGLTKELTLNINLTNSGEDSYMTSMA: 870 SecStr :SS EEEEE EE SS------- SS EE TTS S EEE B SSSSTT EEE EES - TTTTSSEEEEE EEE SS SEE : ExpBur :ebebebebebebeeeee-------ebeebbbbbbeeeeeebeeebebebeeeeeeebbbebebebeeee-ebeeeeeeeeeebebebebebeebbbbbbb: queryA 821:LHFPPGLSFRKVEMLKPHSQIPVSCEE-LPEESRLLSRALSCNVSSPIFK---AGHSVALQMMFNTLVNSSWGDSVELHANVTCNNEDSDLLEDN: 911 :* * * * ** * * * * * * * * * ** * * * ** ** * : 8zjf_B_1 871:LNYPRNLQLKR--MQKPPSP-NIQCDDPQPVASVLI---MNCRIGHPVLKRSSAHVSVVWQLEENAFPNR----TADITVTVTNSNERRSLANET: 955 SecStr :EE TTEEEEE--EE SS- SSS --- TT S B EEEEEEESS ----SS EEEEEE SSS EEE : ExpBur :bebeeebeeee--eeebeee-ebebeeeeeeeeebe---bebebbebebeeeebeeebbbeeeeeebeee----eebbebebebebeeeeebeee: |