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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 2 (A) | polymer(polypeptide(L)) [964 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | U 2 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 672T(Q) 694E(S) 696R(N) (identity: 0.0 %/29.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4g1e_A_2 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425 :** * * * * * * * * * * * **** * ** *: 4g1e_A_2 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244 SecStr :S TTTTTTT TTSEEEE TTSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS SSEEE GGGTT BTSEEEEE SSSS EEEEEET: ExpBur :eebebebbbebebbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeebbebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb: queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518 :* * * * * * * *** * * ****** * * * * * * * : 4g1e_A_2 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337 SecStr :THHHHT EEEEE ----TTT EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE EEEEEE TTS EEEEEE SSTT--: ExpBur :ebeeeebbbbbbb----beebeeeeebebeeeebebbbbbbebbbbeeeebbbb-bbbbebebebeeeeeebbbbbbbbbbeeebebeeeebebeeee--: queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605 : *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** : 4g1e_A_2 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430 SecStr :S TTSEEEEEESSS SSS EEEEEETT SGGG EEEEE B SSSB SS SEEEE ------- SSS EEEEEEEEE SS SSS EEEEEETTTT: ExpBur :bebbbbbbebebbbeeeeebbbbbbbbbbeeeebbbbbbbbeeebbeeeeebebeb-------ebeeeeeebbbbebbbbeeebbebebbbbbbbbbbbb: queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697 : * *** * ** * * * * * * ** ** ** * * : 4g1e_A_2 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525 SecStr :EEEEE B EEEEEEEEEEESSEEETT SB TTSS B EEEEEEEEEEEE SS S-----EEEEEEEEEESTTS TTS EEETTT SSEEEEEE: ExpBur :ebbbbbbbbbbebeeebebeebbbbbeeeebebeeeeeebbbbebebbbebebeeebee-----ebebebebbbbeeeeeeeebbbbbbeeeebebeeeb: Contact : b b b queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * * ** * * * * *** * * * **** * * ** : 4g1e_A_2 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614 SecStr :EEEBSS EEEEEEE GGG S SS EEEEEEEEE-------- SSTT SSS EE SS SEEEEEEEEE S-- SS EEEEEE- : ExpBur :ebbeeeeeebeeeebbbeeeeebeebeeebbbbbebeb--------ebeebebeeebbbebeeeeeeebeeebbbbee--beeeeebebebebebe-eee: queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890 : * * * ** * * * * ** * * * * *** * * : 4g1e_A_2 615:KKIYIXDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709 SecStr : EE - EEEEEEEEEEE SS BTT EEEEE SSEEEEEE- S SSS EEEE TT--- EEEEE SSB- TT EEEEEEEEEE SSS S: ExpBur :eebeb-eebebebebebbbebeebbebebbbebeebbeeeeb-beeeeebeeeebeeeeeee---eebbbbebeeeb-eeeeeeebbbebebeeeeeeee: queryA 891:SVELHANVTCNN: 902 :** *: 4g1e_A_2 710:SVKFDLQIQSSN: 721 SecStr :EEEEEEEEE S : ExpBur :bbebebebebbb: |