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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [920 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | S 1 (A) | non-polymer(MN) | MANGANESE (II) ION | 771C 774D 776K(V) 812E (identity: 75.0 %/29.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4mmz_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425 :** * * * * * * * * * * * **** * ** *: 4mmz_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244 SecStr :S STTTTTT TTSEEEE SSSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS TT EE GGGTT BTSEEEEE STT S EEEEEET: ExpBur :eebebebbbebebbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeebebeeebebeeeeeeeeebebbbbbbbbebeeeeebbbbbbbb: queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518 :* * * * * * * *** * * ****** * * * * * * * : 4mmz_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337 SecStr :THHHHT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT EEE SS EEE EEEEEE SSSS EEEEEE SSTT--: ExpBur :ebeeeebbbbbbb----beebeeeeebebebeebebbbbbbebbbbeeeebbbb-bbbbebebeeeeeeeebbbbbbbbbbeeeeebeeeebebeeee--: queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605 : *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** : 4mmz_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430 SecStr :S TTSEEEEETTTT SSS EEEEEETT SGGG EEEEEEEETTEEEEEEEEEEE ------- S SSS TTSEEEEEE SSTTSS EEEEE SSS: ExpBur :bebbbbbbebebbbeeeeebbbbbbbbbbeeebbbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebeeebbebebbbbbbbbbbbb: queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697 : * *** * ** * * * * * * ** ** ** * * : 4mmz_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525 SecStr :EEEEE B EEEEEEEEEEE SEE TT EE SSS EE B EEEEEEEEE SSS S-----EEEEEEEEES SSS SSS EE TTT SSEEEEEE: ExpBur :bbbbbbbbbbbebebebebeeeebebeeeeeebeeeeeebbebebebbbebebeeebee-----ebbbebebbbbeeeeeeeeebbbbbeeeeeebeeeb: queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * * ** * * * * *** * * * **** * * ** : 4mmz_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614 SecStr :EEESSS EEEEE EE TTSSS SS EEEEEEEEE-------- S TTSS EE SS SEEEEEEEE S-- TTTTS EEEEEE- S : ExpBur :ebeeeeeeeeeebbbbbeeeeebebeeebbbbbbebee--------eeeeeeebeebebeeeeeeeeebeeebbbbee--beeeeebebebebebe-eee: Contact : b b b queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890 : * * * ** * * * * ** * * * * *** * * : 4mmz_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709 SecStr : EEETTS EEEEEEEEEE SS BTTEEEEEE TT EE - S SSS EEEEEE SS--- EEEEEEEESSB- SS EEEEEEEEE SS : ExpBur :eebebeeebebbbebebbbeeebbbebebbbebbebbebeeb-beeeeebeebeeeeeeeee---eeebebebeeeb-eeeeeeebbbebbbeeeeeeee: Contact : b queryA 891:SVELHANVTCNN: 902 :** *: 4mmz_A_1 710:SVKFDLQIQSSN: 721 SecStr :EEEEEEEEE S : ExpBur :ebebebebebeb: |