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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [920 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | R 1 (A) | non-polymer(MN) | MANGANESE (II) ION | 771C 772G 774D 776K(V) 812E (identity: 80.0 %/29.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6mk0_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425 :** * * * * * * * * * * * **** * ** *: 6mk0_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244 SecStr :S STTTTTT TTSEEEE SSSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS TT EE GGGTT BTSEEEEE STT S EEEEEET: ExpBur :eebebebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeeeebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb: queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518 :* * * * * * * *** * * ****** * * * * * * * : 6mk0_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337 SecStr :THHHHT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE TTSSSS EEE-EEETT EEE SSS EEE EEEEEEEETTEEEEEEEEE SSTT--: ExpBur :ebeeeebbbbbbb----beebeeeeebebebeebebbbbbbbbbbbeeeebbbb-bbbbebebeeeeeeeebbbbbbbbbbeeebebeeeebebeeee--: queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605 : *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** : 6mk0_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430 SecStr :S GGGEEEE S SS SSS EEEEETT TGGG EEEEE EETTEE SS SEEEE ------- SSS TTSEEEEEE SSSSSS EEEEE SSSS: ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbeeeebbbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebebebbebebbbbbbbbbbbb: queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697 : * *** * ** * * * * * * ** ** ** * * : 6mk0_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525 SecStr :EEEEE B EEEEE EEEE SEE TT EE SSSS EE EEEEEEEEEEE SSS S-----EEEEEEEEEESSSS SSS EEETTT SSEEEEEE: ExpBur :bbbbbbbbbbbebebebebeeeebebeeeebebeeeeeebbbbebebbbebebeeebee-----ebbbebebbbbeeeeeeeeebbbbbeeeeeeeeeeb: queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * * ** * * * * *** * * * **** * * ** : 6mk0_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614 SecStr :EEESSS EEEEEEEEE TTSS SS EEEEEEEEE-------- TT TTTS EE SS SEEEEEEEE S-- TTTTS EEEEE - : ExpBur :ebeeeeeeeeeebebbbeeeeebeeeeebbbbbbebee--------eeebeeebeebebebeeeeeeebeeebbbbee--beeeeebebebebebe-eee: Contact : bb b b queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890 : * * * ** * * * * ** * * * * *** * * : 6mk0_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709 SecStr : EEETTS EEEEEEEEEE SS BTTEEEEEE TT B- S SSS EEEE SS--- EEEEEEETTB- SEEEEEEEEEEE TTT : ExpBur :eebebeeebebbbebebbbeeebbbebebbbebbebbebeeb-beeeeebeebebeeeeeee---eeebebebeebb-eeeeeeebbbebbbeeeeeeee: Contact : b queryA 891:SVELHANVTCNN: 902 :** *: 6mk0_A_1 710:SVKFDLQIQSSN: 721 SecStr :EE EEEEE S : ExpBur :ebebebebebeb: |