CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [593 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | M 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 444H(N) 446S (identity: 50.0 %/32.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6uja_A_1 identity=32.4% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494 :**** * ** ** * * * * * * *** * * ****** * * *: 6uja_A_1 221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315 SecStr : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE EE: ExpBur :ebbebbbbbebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebebeebebbebbbbbbbbebeebbbb-bbbbebeeeeeeeeeebbbbb: Contact : b b queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGR: 583 : * * * * *** ** * * ** * * ** * ******* ** *** ** ** ** : 6uja_A_1 316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGY: 406 SecStr :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEESTT SSS EEEEEETT SGGG EEEEE TTS SS SEEEE ------- SSS TTS: ExpBur :bbbbbeeeeeeeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebeeeeebbbbbbbbeeebbeeeeebebeb-------ebeeeeeebbbbe: queryA 584:SIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDG: 679 :* * * * * *** * *** * ** * * * * * * ** : 6uja_A_1 407:SMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDK: 501 SecStr :SEEEEE SS SSS EEEEEEGGGTEEEEE B EEEEEEEEEEE SEE TT EEEE SSS EEEEEEEEEEEEEE SSS S-----EEEEEEEEEES : ExpBur :bbebeeebbebebbbbbbbbbbbbebbbbbbbbbbeeeeeeeeeeeebbeeeeeeeeeeeeeebbbbeebebebbebeeebee-----ebbbeeeeebbe: queryA 680:HRTR---RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733 : ** ** * * * * * * ** *: 6uja_A_1 502:LKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 563 SecStr : S TTS SEEETTT SSEEEEEEEEETTS EEEEEEEEE TTS S SS EEEEEEEEEE: ExpBur :eeeeeeebbbbbeeeeeeeeeeebebebeeeeeeeeeeebeeeeeeeeeeeeebebbbebbb: |