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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1084 aa] | Integrin alpha-X :ITAX_HUMAN | |
2 | b | M 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 820D(T) 897N 899T(S) (identity: 33.3 %/37.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4neh_A_1 identity=37.6% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * ** ** * * * * **** ** **** ** * * * ** ** *** * * : 4neh_A_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAADQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98 SecStr : B SSS EEEE STT--TTSEEEEETTTEEEEEEEEEEEETTEEEEEEEE TTT SEEE TT BS BTSEEEEEETTEEEEEEEEEEEEEET: ExpBur :bbbbeeeebebebebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbbeeeebeebebeebeebeebbbbebbbeeeeeebbbbbbbbbebebe: queryA 121:QNTYLSGLCYLFRQNLQGP--MLQGRP-GFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDP: 217 : * ** *** * ** * * *** * *** *** * * * * * ** *** * * * *: 4neh_A_1 99:RNMYLTGLCFLL-----GPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNP: 193 SecStr :TEEEEEEEEEEE----- TTS EEESSS B EEEEEEEE STTS THHHHHHHHHHHHHHHTS TTTEEEEEEEESSSEEEEE HHHHHT SSG: ExpBur :ebebbbbbbbbb-----beeeeeeebeeeebebeeeebbbbbbbbbbeebeeeebebbbebbebbbebbeeebbbbbbbbbbeeeeebbbbeebeebeeb: queryA 218:DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEA-------TDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEF: 310 : ** * * * ** * * *** ** * ** **** * * **** ** * ** * * **** * : 4neh_A_1 194:LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEH: 293 SecStr :GGTTSS S B HHHHHHHHHHHTTSGGGT SSSEEEEEEEE S BB S HHHHHHHHHHTTEEEEEEE GGGTTSHHHHHHHHHHS SSGGGS: ExpBur :eeebeebeeeeeebebbebbeebbeebbeeeebbbeebeebbbbbbbbebeebeeebeebbeebeeeebebbbbbbeebeeeeebeebbbebbbeeeeeb: queryA 311:VKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTW: 410 : * *** * ** **** ** * * ** * **** * ** * *** * **** * : 4neh_A_1 294:IFKVEDFDALKDIQNQLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-DPTFINMSQENVDMRDSYLGYS-TE: 391 SecStr :EEETT TTHHHHH B B GGG TTT B SSTT EEEEEEEETTEEEEEETTHHHHT EEE TTS- EEE TT GGGTTS TTSE-EE: ExpBur :bbebeeeebbeeebeeeeebebbeeeeeeeebeebeebbbbbbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebebbeb-bb: queryA 411:LPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQLGFEE: 506 :* * ******* * * * * ********* ** **** ** * * ***** * *** * * : 4neh_A_1 392:LALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA: 489 SecStr :EEESSSSEEEEEEETTGGGT EEEEEE--EETTEEEEEEEEE SSTTS TTSEEEEE TT SSS EEEEEEEEEE SS EEEEEEEE TT E: ExpBur :bbeeeeebbbbbbbbebeebbbbbbbb--eeeeebeeebebebeeeebbbbbbbbbbebeeeebbbbbbbbbbebeeeeebbbbbbbebbeeeeebeeee: queryA 507:VSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA: 603 :* * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * ****: 4neh_A_1 490:V--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGA: 587 SecStr :E--E SS TT BTSEEEEEE SSSSS EEEEEETTHHHHTBEEEEE EETTTEE SS SEEEEHHHH SS SBTSSEEEEE SSSSS EEEEEE: ExpBur :e--bbbeeebeebebbebbbebeebbeeebbbbbbbbbbbeeeebbbbbbbbeeeebbbeeeebbbbbeeeeeebeebbebbbbebebbebbbebbbbbb: queryA 604:ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGR-HELRRNIA: 700 : * * *** * * ***** ** * ** * * * * * ** * * * * * : 4neh_A_1 588:RGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKTRSLSRVRV: 686 SecStr :TTEEEEEEB EEEEEEEEEEESSSB TTTS S SS - EEEEEEEEEEEEES TT S S EEEEEEEEESTT SS S EETTTSSSEEEEEEE: ExpBur :eebbbbbbbebbbebbeebebeeeebebebbeeeeeeeee-eeebebbbbbebbeebeebeeeeebebebebebbbbeeeeeebbebeeeeeeebebeee: queryA 701:VTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARSRAL: 793 : * * * ** * ** *** * ** *** * * ******* * * ** *** *: 4neh_A_1 687:LGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSL: 774 SecStr :E SEEEEEEEEEEE S S SS EEEEEEEEE------------EE BGGGTSB EE TT EEEEEE B B SSS B EEEEE TT SSE: ExpBur :bebeeeebebebbbebeeeeeeebbebebbbeb------------ebeebeebeebebbbbeeeeeebebebbbbbeeeeeeebebebbbebebeeeeeb: queryA 794:RLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890 : * * * ** * * *** * * * * * * ** ** * * **: 4neh_A_1 775:LVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGD: 873 SecStr :EETT EEEEEEEEE SS EEEEEEEEEEETTEEE SSSS S EEEEEEETTT-TEEEEEEEEEEEEE SS EEEEEEEEEE TT S: ExpBur :bbeeeeebebebebebeeeebbbbbbebebeebbebeeeeeeeeeeeeeeeebeeeeeeeeee-eeebbebebeeeebeeeeeeebebbbebeeebebee: Contact : b queryA 891:SVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---VGV: 975 : * *** * ** * * * * * * * * * *** * * * *** * *: 4neh_A_1 874:RLLLTANVSSESNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLCFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEV: 969 SecStr :EEEEEEEEE SS ---- S EEEEEEEEEEE EEEEE S S EEEEETT TT EEEEEEEEEEEE SSS EEEEEEEEEEEEETTEESEEEEEE: ExpBur :ebebbbebebeeee----eeeeeeeeeeebebebbbbbbbeebeebbeebebbeeeeeeeeebebebbbbbebebebebbbbbebbbebeeeebbeebeb: Contact : b b queryA 976:PQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFHLYG:1069 : * * * ** * * * *** * * * * * * * * * * * * *: 4neh_A_1 970:SHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQLPG:1065 SecStr :E --SS EEEEE HHHHHHHS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESGGGGGT SEE-EEEEEEEEE TTTEEE TT: ExpBur :ebe--eeeeeeeeeeeeeeeeeeeeeebeeee-bbeeebbbbbebebebeebbbebebbbbbebebbbbbbeebeeeeb-ebbbbbebebeeeebebeee: queryA 1070:SNA:1072 : *: 4neh_A_1 1066:QEA:1068 SecStr : GG: ExpBur :eee: |