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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [751 aa] | Isoform 2 of Integrin alpha-M :ITAM_HUMAN | |
2 | b | H 1 (A) | non-polymer(CA) | CALCIUM ION | 530D 531I(V) 532N 534D 536L 538D (identity: 83.3 %/39.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7p2d_A_1 identity=39.8% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQV-GNGVIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * * * ** * * * * **** * * ****** ** * * * ** ** *** * ** : 7p2d_A_1 1:FNLDTENAMTFQ--ENARGFGQSVVQLQGSRVVVGAPQEIVAANQRGSLYQCDYSTGSCEPIRLQVPVEAVNMSLGLSLAATTSPPQLLACGPTVHQTCS: 98 SecStr : B STT EEEE-- S TTTTS EEE SSSEEEEEETT SSTT EEEEEESSS SEEE TT BT TTSEEEEETTTTEEEEEEEEEEEEET: ExpBur :bbbbeeeeeebe--eebebbbebbbbbeebbbbbbbbeeeeeeeeebbbbebebeeeebeebeeebeeebeebbbbebbbebeeeeebbbbbbbbebebe: queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220 : *** *** ** ** * * ** *** * * * * ** * * * * * * * *: 7p2d_A_1 99:ENTYVKGLCFLFGSNLRQQPQKFPEALRGCPQEDSDIAFLIDGSGSIIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFRIHFTFKEFQNNPNPRSL: 198 SecStr :TEEEEEEEEEEE S SSS EEESSS SEEEEEEEE TTS HHHHHHHHHHHHHHHHHH SSSEEEEEEEESSSEEEEE HHHHHHS HHHH: ExpBur :eeebbbbbbbbbeeebeeeeeebbeebeeeeeeebbbbbbbbbbeebeeebbeebbebbbbbbeebeeeebbbbbbbbbeebeeebbbeebeeeeebeeb: queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDS--GNIDAAKD-----IIRYIIGIGKHFQTKESQETLHKFASKPASEFVKI: 313 : * * * * * * * ** *** * * * ***** * * *** ** * * * * **** * : 7p2d_A_1 199:VKPITQLLGRTHTATGIRKVVRELFRITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQ: 298 SecStr :HTT S HHHHHHHHHHTTS GGGT TTSEEEEEEEE S S SS HHHHHHHHHHTT EEEEEEESGGGSSHHHHHHHHHHS SSHHHHEEE: ExpBur :beebeeeeeebbbbbbbbebbeebbeeeebbeeebbbbbbbbbbbeeeebeeebeebbeebeeeebebbbbbbbeebeeeebeeebbebbbeeeeebbeb: queryA 314:LDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPS: 413 : ** ** * ** **** ** * * * ** ** ***** * *** **** : 7p2d_A_1 299:VNNFEALKTIQNQLREKIFAIEGTQTGSSSSFEHEMSQEGFSAAITSNGPLLSTVGSYDWAGGVF-LYTSKEKSTFINMTRVDSDMNDAYLGYAAAII-L: 396 SecStr :ESSGGGHHHHHHHHHHHHHHHH SS SS SSS EEEEEEE SSSEEEEETTSTTTTBEEE-E SSSSS B S STTTTT BTSSEEEE-E: ExpBur :beebebbeebbeebeeebeeeebeeeeeeeeeebebbebbebbbbbeebbbbbbbbbebebbbbb-bbeeeeeeeebebeeeeeebeebebbebbbeb-e: queryA 414:RQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIY-----QRRQLGFEEVS: 508 :* * ******* * * * * * * ***** *** ** **** * * * ***** * *** * ** * : 7p2d_A_1 397:RNRVQSLVLGAPRYQHIGLVAMFR--QNTGMWESNANVKGTQIGAYFGASLCSVDVDSNGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGQRARWQCDAV-: 493 SecStr :ETTEEEEEEEEEEETTEEEEEEEE--EETTEEEEEEEEE STTS TTSEEEEE SS SS EEEEEETT BTTB BEEEEEE SS EE-: ExpBur :eeeeebbbbbbbebeeebbbbbbe--eeeeebeeebebeeeeeebebbbbbbebbbeeebbbebbbbbbbebebeebbbbbbbbebeeeeeeebeeeee-: queryA 509:ELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE--QGAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAES: 605 : * * * * **** * * * * *** * *** *** ** **** * * * * ** **** * * ** * * ** *** * *** : 7p2d_A_1 494:-LYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIGAPGEEDNRGAVYLFHGTSGSGISPSHSQRIAGSKLSPRLQYFGQSLSGGQDLTMDGLVDLTVGAQG: 592 SecStr :-E TT TT BTSEEEEEE SSSSSS EEEEEETTHHHH EEEEE EETTTEE SS SEEEEHHHH TT STTSEEEESS SSSSS EEEE SS: ExpBur :-bebeeebeebebbebbbebeebbeeebbbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebbbbbeeeeeebeebbebbbbeeebbebebebbbbbbee: Contact : bbb b b b queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI-KSLIPQF-QGRLVANLTYTLQLDGHRTRRRGLFPGGRHELRRNIAVT-: 702 : * * ** * * * * ** * ** * ** * ** * ** * * * ** * : 7p2d_A_1 593:HVLLLRSQPVLRVKAIMEFNPREVARNVFECNDQVV-KGKEAGEVRVCLHVQKSTRDRLREGQIQSVVTYDLALDSGRPHSRAVFNETKRSTRRQTQVLG: 691 SecStr :EEEEE B EEEEEEEEE TT S TTS SS - EES B EEEEEEEESS SS SS EEEEEEEEESTTSSS S EETTTSSS EEEEEEE : ExpBur :bbbbbbbbbbbebebebebeeeeeeeeebeeeeeee-eeeeeeebebbbebebebebebeeeebebebebbbebbeeeeeebbebeeeeeeeeebeeebe: queryA 703:TSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTP: 740 : * * * * *** ***** ***: 7p2d_A_1 692:LTQTCETLKLQLPNCIEDPVSPIVLRLNFSLV---GTP: 726 SecStr :SS EEE BEEEESS S S S EEEEEE EE---E : ExpBur :eeeeeeebebeeebeeeeeeeebebebebebe---bee: |