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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 2 (A) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
2 | b | E 2 (E) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 64G(A) 65N (identity: 50.0 %/37.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3k72_A_2 identity=37.7% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120 : *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * : 3k72_A_2 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98 SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE TT S TTSEEEEEETTEEEEEEES EE S: ExpBur :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbbbebebe: Contact : bbb queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220 : * ** *** * : 3k72_A_2 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110 SecStr :S EE EEEEE----------------------------------------------------------------------------------------: ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------: queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320 : : 3k72_A_2 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342 : : 3k72_A_2 111:----------------------GPTQLTQRLPVSRQECPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188 SecStr :----------------------SSS EE S S -------------------------------------------------------------: ExpBur :----------------------eeeeeeeebeeeeeeee-------------------------------------------------------------: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 3k72_A_2 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405 : ** * * ** * **** * ** *** * ***: 3k72_A_2 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387 SecStr :------------------------------------- SSB TTSSB TT EEEES STTTTBEEEE SSS- EEE SS S BT: ExpBur :-------------------------------------eeeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebebb: queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQ: 501 :* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * : 3k72_A_2 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484 SecStr :SS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT : ExpBur :eb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeeeee: queryA 502:LGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLAD: 598 : * * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** *: 3k72_A_2 485:WWCDAV--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVD: 582 SecStr : S SS-- S SS BTS EEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS S SSEEEEEEEEE S SSS E: ExpBur :bebebe--bebeeeeeebebbebbbebbebbbeeebbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebebbbeeeeeebeebbbbbebebebbeeebbb: queryA 599:VAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-L: 695 : **** * * *** * * ***** ** * ** * * * * * ** * * * *: 3k72_A_2 583:LAVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSL: 681 SecStr :EEEEESS EEEEEB B EEEEEEESS S STTTS SSS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS BTTT SSEE: ExpBur :bbbbbeebbbbbbbbbbbebbeeeebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeeb: queryA 696:RRNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPA: 788 : * * * * ** * ** *** * ** *** * * ******* * * ** *** : 3k72_A_2 682:SRVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFP: 769 SecStr :EEEEEE SS EEEEEEEE S S SS EEEEEEE ------------ SSTTS B SS EEEEEE SSS EEEE T: ExpBur :eeeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebe: queryA 789:RSRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVN: 885 : * * * * ** * * *** * * * * * * ** ** * * : 3k72_A_2 770:GLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPK: 868 SecStr :T S EESS S EEEEEE SS BSS EEEEEEETTEEEE SS S EEEEEE SSS-SEEEEEEE TTS B TT EEEEEEEEE TT: ExpBur :eeeebbbeeeeebebebebebeebebebbebebebbebbebeeeeeeeeeeeebebebebeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeee: queryA 886:SSWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV-: 972 : ** * *** * * ** * * * * * * * * * *** * * * *** : 3k72_A_2 869:AVLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVW: 964 SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEEE S S SS EEEEEEEEE SSS EEEEEE STT SB: ExpBur :bebeeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebebebebeeebebbbbbbbbbebeeeebb: queryA 973:--VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKH:1064 : * * * * * ** * * * *** * * * * * * * * * * * : 3k72_A_2 965:MDVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVY:1060 SecStr : S EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEES TT EEEEEE B SGGGGTTT SS -EEEEEEEEE TTTE: ExpBur :eebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeee: queryA 1065:FHLYGSNA:1072 : * * *: 3k72_A_2 1061:SQLPGQEA:1068 SecStr :EESSS G: ExpBur :bbeeeeee: |