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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [440 aa] | Integrin alpha-V heavy chain :ITAV_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [242 aa] | Integrin beta-6 :ITB6_HUMAN | 403Y 406Y 426R 428Q(R) 429H(T) 457G(A) 459Y 462G(F) 483P 484L 486Y(M) 490R(E) 516Y(F) 520R 523E(S) 545L(Y) 583R(Y) (identity: 41.2 %/38.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8tcg_A_1 identity=38.4% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494 :**** * ** ** * * * * * * *** * * ****** * * *: 8tcg_A_1 221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315 SecStr : BTSSEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE EE: ExpBur :ebbbbbbebebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebeeeebbbbebbbbbbbbebeebbbb-bbbbebeeebeeeeeebbbbb: Contact :b b b bb b b b bb b b b queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582 : * * * * *** ** * * ** * * ** * ******* ** *** ** ** **: 8tcg_A_1 316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 406 SecStr :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEESTTSSSS EEEEEETT SGGG EEEEE EETTEE SS SEEEE ------- S SSS TT: ExpBur :bbbbbeeeeeeeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebeeeebbbbbbbbbeeebbeeebebebeb-------ebeeeeeeebbbb: Contact : b b b b bb queryA 583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614 : * * * * * *** * **: 8tcg_A_1 407:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARP: 440 SecStr :SSEEEEE SS SSS EEEEEEGGGTEEEEEEE : ExpBur :ebbebebebeeeebbbbbbbbbbbbbbbbbebee: Contact :b b |