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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [946 aa] | Integrin alpha-IIb :ITA2B_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [718 aa] | Integrin beta-3 :ITB3_HUMAN | 400R(F) 401A(D) 403Y 406Y 429H(W) 455Q 456I(M) 457G(A) 459Y 484L 487G(M) 491G(A) 516Y 520R 545L(Y) 563P(S) 564Q(R) 583R(F) 680H(Q) 681R(K) 719Q(R) 830R 838H(F) 840Q(R) 865S(N) (identity: 32.0 %/30.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8t2v_A_1 identity=30.9% |
queryA 396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491 : ** ** ** * * *** * * * * **** ** ** ** **** * * * : 8t2v_A_1 227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319 SecStr : GGGTT TTSEEEEE SS SSS EEEEEETTHHHHT EEEEE T-----T EEEEEE SSTT TTSSEEEE SS SSS EEE-EEETT- EE SS: ExpBur :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeebbbbbbbbe-----ebeeeeebeeeeeebebbebbbbbbbbeeeeebbb-bbbbe-bebeeee: Contact : bb b b bb bbb b b b bb queryA 492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578 : *** ** * * * **** ** * * ** * ** ** * * * * ** *** : 8t2v_A_1 320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGSA: 416 SecStr : S EE BEEEEE STT S SEE-EE STT-- BTSEEEEEESTTSSSS EEEEEETT TTTTS EEEEE EETTEE SS SEEEE S TT : ExpBur :eeebbbbbbbbbebeeeeeebeeeeee-bebeeee--bebbbbbbebeebbeeeeebbbbbbbebbeebebbbbbbbbeeebbeeeeebebebebeeebb: Contact :bbb b b b b bb queryA 579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSL-IPQFQGRLVANLTYTL: 675 : ** * * * * * *** * * *** * * ** * *** * *: 8t2v_A_1 417:--FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPVVKASVQLLVQDSLNPAVK-SCVLPQTKTPVSCFNIQMCVGATGHNIPQ-----KLSLNAEL: 508 SecStr :--TTSSEEEEE SS SSS EEEEEETTTTEEEEEEE EEEEEEEEEE SEE TT - EE TTS EE EEEEEEEEEEE SS S-----S EEEEE: ExpBur :--bbebbebeeebeeeebbbbbbbbbebeebbbbebbbbbebebebeeebbbeeeee-ebeeeeeeeebbbbebebbbbbeeeeeee-----ebbbbbeb: Contact : b b queryA 676:QLDGHRTR--RRGLFPGGRHELRRNIAVTTSMSCTDFSFHFPVC------------VQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSE: 761 :*** * ** * * * * * * * *** *** ** * * * * : 8t2v_A_1 509:QLDRQKPRQGRRVLLLGSQQ-------AGTTLNLDLGGKHSPICHTTMAFLRDEADFRDKLSPIVLSLNVSLPPTEA--------GMAPAVVLHGDTHVQ: 593 SecStr :EES SS GGG SEEETTT -------SEEEEEE TT S EEEEEEEEE GGG SS EEEEEEEE T--------T S EEEE EEE: ExpBur :ebbeeeeeeebbbbbeeeee-------bebeeebebbeeeeeeeeebebbbeeeeebeeeebebbbbbebeeeeeee--------eeeeebebeeeeebe: Contact : bb b b queryA 762:TWEIPFEKNCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSF-RKVEMLKPHSQIPVSCEELPEESRLLSRALS: 860 : **** * * * * * * * * * ** * * * * * * * * : 8t2v_A_1 594:E-QTRIVLDCGEDDVCVPQLQLTASVTGS-PLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNVEGFERL--ICNQKKENE---TRVVL: 686 SecStr :E-EEEE SS TTSS EEEEEEEE - EETTS EEEEEEEEEEE SS SSEEEEEE TT EEEEEESS SS -- EEEEESSS---SEEEE: ExpBur :e-ebbbbeebeeeeebebebebeeeeeee-ebebebebebbbebebebebbbbbbbbbbbbbbeebeeeebebeeeeeeee--ebeeeeeee---eebbe: Contact : bb b b queryA 861:CNVSSPIFKAGHSVALQMMFNTLVNSSWGDSVELHANVTCNNEDS: 905 :* * * * * ** * : 8t2v_A_1 687:CELGNPM-KKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQN: 730 SecStr :EEEETT - TT EEEEEEEEEE SSS SEEEEEEEEE SSS: ExpBur :bebbeeb-eeebeebbebebebeebeeeeeebebebbbebebeee: Contact : b |