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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [924 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [685 aa] | Integrin beta-3 :ITB3_HUMAN | 683R(K) 719Q(R) 829F 830R(I) 845C 847E(F) 862N(D) 863V(L) 864S(G) (identity: 22.2 %/29.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6avr_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425 :** * * * * * * * * * * * **** * ** *: 6avr_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244 SecStr :S STTTTTT TTSEEEE STTEEEEE TTHHHHTB EEEEEHHHHHHS TT S TT EE GGGTT BTSEEEEE SSSSS EEEEEET: ExpBur :eeeeeeebbbbbbbebebebeeebebebbbebbebbbbbbebbeebeeeeeeeeeeeeebeeebeeeeeeeebeebbbbbbbbebeeeeeeebbbbbbbb: queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518 :* * * * * * * *** * * ****** * * * * * * * : 6avr_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337 SecStr :TTTTTT EEEEEE----TTEEEEEEEEE SSTTS TTSEEEEE TTSSS EEE-EEETT EEE TTS EEE EEEEEE TTS EEEEEE SSTT--: ExpBur :bbeeebbbbbbbe----eeeeeeeeeeeeebeebbbbebbbebbbeeeeeebeb-bbbbebeeeeeeeeebebbbbeeeeeeeeeeeeeeeeeeeeee--: queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605 : *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** : 6avr_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430 SecStr : TTSEEEEEE TTSSS EEEEEETT SSS EEEE EETTEE S SEEEE ------- SSS TTSSEEE SSSS EEEEEGGGT: ExpBur :bbbbebbbebbeeeeeebbbeeebbbbbeeeebbebbbbeebeeeeeeeeebeeee-------ebeeeeeebebbbbebeeeeeeebebbbebbbbbeeb: queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697 : * *** * ** * * * * * * ** ** ** * * : 6avr_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525 SecStr :EEEEE B EEEEEEEEEESS EE TT EEEE TTSS EEEEEEEEEEEEEEE SS S-----EEEEEEEEEESTTTTTTS EEETTT SSEEEEEE: ExpBur :bbeebbbbbebeeeeeeeeeeeeeeeeeeebeeeeeeeebbebeebeebbeeeeeeeee-----ebbbeeeeebbeebeeeeeebbbbbeeeeeeeeeee: Contact : bb b queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * * ** * * * * *** * * * **** * * ** : 6avr_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614 SecStr :EEETTT EEEEEEEEE TTT SSS EEEEEEEEE-------- SGGG TTS EE TT SEEEEEEEE S-- TTTT B EEEEEE-ES : ExpBur :ebeeeeeeeeeeeeebeeeeeebeeeeeeeeebbeeee--------eeeebeeeeeebeeeeeeeeeebebeeeeeee--beeeeeeebebebeee-eee: Contact : b queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890 : * * * ** * * * * ** * * * * *** * * : 6avr_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709 SecStr : EEETTS EEEEEEEEEEE SB SS EEEEE TTEEEEEE- S TTS EEEE SS--- EEEEE SS - TT EEEEEEEEE SS S: ExpBur :eebbbeeebeeeeeeeeebeebbebebeeebebeeeeeeeee-eeeeeebeebeeeeeeeee---ebeeebeeeeeb-eeeeeeebbebbebeeeeeeee: Contact : bb b b bbb queryA 891:SVELHANVTCNN: 902 :** *: 6avr_A_1 710:SVKFDLQIQSSN: 721 SecStr :EEEEEEEEE : ExpBur :eeeeebbbbbeb: |