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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [583 aa] | Integrin alpha-L :ITAL_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [453 aa] | Integrin beta-2 :ITB2_HUMAN | 43R 44H 47Y 48R 61P 63E 94Y 97M 116S 120D 121Q 122N 123T 125L 341D 345F 354I 368V 373W 401A 403Y 406Y 426R 429H 430M 455Q 456I 457G 459Y 484L 486Y 518L 520R 580W (identity: 100.0 %/98.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5e6u_A_1 identity=98.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 125 :****************************************************************************************************: 5e6u_A_1 1:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 100 SecStr : B GGG EEE TT TTTTSEEEEETTEEEEEE TT EEEEEETTT EEE TT TTTTSEEEE TTT EEEEEEEEEEEETTEEEE: ExpBur :ebbbbeeeeebebeeeeeebbeebbbeeebbbbbbbbeeeeebebbbbeeeeeebeebebeeeeeebeebbbbbbebeeeebbbbbbbbbebebeebebe: Contact : bb bb b b b b b bbbb b queryA 126:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVK: 225 :**************************************************************************************** ***********: 5e6u_A_1 101:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVK: 200 SecStr :EEEEEEESS TTS EEEE TT SSEEEEEEEE BTT HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSSEEEEE HHHHHTT HHHHTTT : ExpBur :bbbbbbbeeebeeebeebebbbbeebebebbbbbbbbbbeebeeebbeebbebbbebbeebeeeebbbbbbbbbeeeeebbebeebeeeeebebbbeebe: queryA 226:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 325 :****************************************************************************************************: 5e6u_A_1 201:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 300 SecStr : B HHHHHHHHHHHTS GGGT TTSEEEEEEEESS S S GGGTTSEEEEEEESGGG SHHHHHHTGGGS S HHHHEEEESSGGGGTTHHH: ExpBur :beeeebbbbbbbeebbeebbeeeeebbeebbebbbbbbbbeeeeeeebeebeebbbbbbbbbeebeeeebbeebeebbbebbeebbbebeebeebeebbe: queryA 326:ELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 425 :****** **************************************************************************************: 5e6u_A_1 301:ELQKKIXXXXXXXXQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 400 SecStr :HHHH -------- SS SSTT EEEEEEEETTEEEEEETTHHHHTBEEEEE TTSS EEEEE SS TTTTT BTSEEEEE BSSS EEEEEET: ExpBur :ebbebb--------eeeeebebbbbbbbebbebbeeebbbbbbbbeeebbbbbbbeeebeebeebbbeeeeeebeebebbebbbbbebeeeebbbbbbbb: Contact : b b b b b b b b queryA 426:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 525 :****************************************************************************************************: 5e6u_A_1 401:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 500 SecStr :TGGGT EEEEEE TT EEEEEEE STTS TTSEEEEE SS SSB EEEEEETT TTB EEEEEEE SSSEEEEEE SSBTTS TTSEE: ExpBur :ebeeebbbbbbebeeeeeebeeeeebebeeeebebbbbbbebbbeeeebbbbbbbbbbebeeeebbbbbbbbebeeeebeeeebbebeeeeeebebbebb: Contact :b bb bbb b b b b b queryA 526:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVV: 616 :*******************************************************************************************: 5e6u_A_1 501:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVV: 591 SecStr :EE SSSSSS EEEEETTSTTBEEEEE EETTEE SS SEEEEHHHH TT SBTSEEEEEE SSSSSSEEEEEEETTEEEEEEB S : ExpBur :bebeebeeeebbbbbbbbbebeebbbbbbbbeeebbeeeeebebebeebeeebeebbbbbbbeebeeeeeebbbbbbbbeebbbbbbeeee: Contact : b |