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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [452 aa] | Integrin alpha-5 :ITA5_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [424 aa] | Integrin beta-1 :ITB1_HUMAN | 354I(F) 373W 403Y 406Y 426R(K) 429H(T) 430M(Y) 456I(M) 457G(A) 459Y 462G(Y) 484L 486Y(M) 490R(E) 518L(F) 520R 545L(F) 580W(F) (identity: 33.3 %/35.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4wjk_A_1 identity=35.3% |
queryA 353:GISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRA-------------GYLGYTVTWLP-SRQKTSLLASGAPRYQ-HMGRVLLF: 436 :* ** * * * * * * * * * * **** * * * * * * * : 4wjk_A_1 167:GFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYY-PEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTIL: 265 SecStr :TSEEEE TT EEEEETTHHHHTBEEEEE HHHHHHT -TT S TT EE GGG S BTSSEEEE SSSSS EEEEEETTTTTTT EEEEE: ExpBur :bebbbbbeebbbbbbbbbbbeebbbbbbbebeebbebee-eeebebebeebeebeeeeeeeeebebbbbbbbbbbeeeeebbbbbbbbebeeeebebbbb: Contact : b b b b b b bbb queryA 437:QEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTD: 530 : * * * **** ** ** ** **** * *** * * * * **** * * *: 4wjk_A_1 266:N----GSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLL-VGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGD: 360 SecStr : ----TTT EEEEEE SSTTS TTSEEEEE SSSSS EEE-EEETT EEE TTS EEE EEEEE EETTEE SS SEEEE STT TTSEEEEEE : ExpBur :b----beebeeeeebebeeeebbbbebbbbbbbbeeeeebbb-bbbbebeeebeeeeebbbbebbbbbbeeebbeeebebebebeeeebebbbbbbebeb: Contact : bb b b b b bbbb b b b queryA 531:INGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI-QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVV: 616 : ** *** *** ** * * * *** *** * ** * ** * * * ** * ****: 4wjk_A_1 361:LDQDGYNDVAIGAPFGGETQQGVVFVFPGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRPVV: 452 SecStr :SS SSS EEEEEETT STTSS EEEEE TTSS SS SEEE SS SS TTSEEEEEE SS SSS EEEEEEGGGTEEEEE B : ExpBur :beeeeeebbbbbbbebbeeebbbbbbbebbeebbeeeeebebebebeeeeeebebbebbbbeeebeeeeebbbbbbbbbebebbbbebeeee: Contact : b b b b |