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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [913 aa] | Integrin alpha-IIb :ITA2B_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [680 aa] | Integrin beta-3 :ITB3_HUMAN | 401A(D) 403Y 406Y 425P 426R(T) 429H(W) 430M(L) 453G 454T(E) 455Q 456I(M) 457G(A) 458S 459Y 460F 462G(H) 481G 482A 483P 484L 486Y 487G(M) 488E 489Q(S) 490R 491G(A) 492G 493R 494V 495F(Y) 508S(L) 510L 511Q(T) 512G 513D(T) 514P(Q) 515G(L) 516Y 519G 520R 521F 523E(S) 543A 544P 545L(Y) 546E(S) 547E(G) 548Q(R) 550A(Q) 564Q(R) 575L(T) 576S(G) 577G(S) 578I(A) 583R(F) 628E(L) 629I(N) 630P 631V(A) 632H(V) 633E(K) 636C 637S(V) 638Y(L) 641S(T) 642N(K) 643K(T) 644M(P) 645K(V) 646E(S) 678D 679G(R) 680H(Q) 681R(K) 682T(P) 683R 684R 685R 686G(V) 687L 689P(L) 692R(Q) 718V(F) 719Q(R) 720D 721L(K) 722I(L) 723S 724P 725I 726N(V) 759H 761E(Q) 764E(Q) 767F(I) 768E(V) 769K(L) 770N(D) 771C 772G 773E 775K(D) 813D(G) 814A 833E(S) 834M(N) 835L(V) 836K(E) 837P(G) 838H(F) 839S(E) 840Q(R) 865S(N) 866P 867I(M) 869K 870A(K) 871G(N) 872H(A) 873S(Q) (identity: 36.7 %/30.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4cak_A_1 identity=30.9% |
queryA 396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491 : ** ** ** * * *** * * * * **** ** ** ** **** * * * : 4cak_A_1 227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319 SecStr : GGGTT TTSEEEEE SS SSS EEEEEETTTTTTT EEEEE T-----TS EEEEEE SSTTS TTSEEEEE SSSSSSBEEE-EEETT- EE SS: ExpBur :eebbeebebbebbbebbbeeeeeebbbbbbbbbbbeeebbbbbbbe-----ebeeebbbebeeeebbbbebbbbbbbbbbbbebbb-bbbbe-bbeeeee: Contact : b b b bb bbb bbbbbbbb b bbbb bbbbbbb queryA 492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578 : *** ** * * * **** ** * * ** * ** ** * * * * ** *** : 4cak_A_1 320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGSA: 416 SecStr : TTEE EEEEE SSSSEE S SEE-EE STT--S TTSSEEEEESSSSSSS EEEEEETT SSSSS EEEEE EETTEE SS SEEEE SS TTS : ExpBur :eeebebbbbbbbbbbbbbbbbbbbbbb-bbbeeee--bebbbbbbebbbbbbbebebbbbbbbebbeebebbbbbbbbbbbbbbbeeeeebebebeeebb: Contact :bbbbbbbbbb b bbbbbbb bbb b bbbbbbbbb b b bbbb queryA 579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSL-IPQFQGRLVANLTYTL: 675 : ** * * * * * *** * * *** * * ** * *** * *: 4cak_A_1 417:--FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPVVKASVQLLVQDSLNPAVK-SCVLPQTKTPVSCFNIQMCVGATGHNIPQ-----KLSLNAEL: 508 SecStr :--EEEEEEEEE SSBSSS EEEEEETTTTEEEEE EEEEEEEEE S B TT - EE SSS EEEEEEEEEEEEEE TT S-----S EEEEEE: ExpBur :--bbebbebeebbbebbbbbbbbbbeebeebbbbbbbbebebebebebeeebeeeee-ebebeeeeeebbbbebebbbbbeeeeeee-----ebebebeb: Contact : b b bbbbbb bbb bbbbbb queryA 676:QLDGHRTR--RRGLFPGGRHELRRNIAVTTSMSCTDFSFHFPVC------------VQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSE: 761 :*** * ** * * * * * * * *** *** ** * * * * : 4cak_A_1 509:QLDRQKPRQGRRVLLLGSQQ-------AGTTLNLDLGGKHSPICHTTMAFLRDEADFRDKLSPIVLSLNVSLPPTEA--------GMAPAVVLHGDTHVQ: 593 SecStr :EETTTS GGG SEEETTT S-------SEEEEEEE TT SS EEEEEEEEE GGG SS EEEEEEEE T--------T B EEE EEE: ExpBur :bbbeeeeeeebbbbbbeeee-------beeeeebebbeeeeebeeeeebbbeeeeebeeeeebbbbbbebbbeebee--------eeebbbbbbbbbbbb: Contact : bbbbbbbbbbbb b b bbbbbbbbbbbbbbbb b b queryA 762:TWEIPFEKNCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSF-RKVEMLKPHSQIPVSCEELPEESRLLSRALS: 860 : **** * * * * * * * * * ** * * * * * * * * : 4cak_A_1 594:E-QTRIVLDCGEDDVCVPQLQLTASVTGS-PLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNVEGFERL--ICNQKKENE---TRVVL: 686 SecStr :E-EE B TTTT EEEEEEEES -SEETTS EEEEEEEEE SS BTTEEEEEE TTEEEEEEEE -- BB-- EEEE SSS---S EEE: ExpBur :b-bbbbeeebbbbbbbbbebebeeeeeee-ebeeeeebebebebebbbebbbbbbbbbbbbbbebbbbbebebee--eebb--bbbbbbeee---ebbbb: Contact : b bbbbbbb b bb bbbbbbbb queryA 861:CNVSSPIFKAGHSVALQMMFNTLVNSSWGDSVELHANVTCNNEDS: 905 :* * * * * ** * : 4cak_A_1 687:CELGNPM-KKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQN: 730 SecStr :EEEETTB- TTEEEEEEEEEEE TT SEEEEEEEEE SSS: ExpBur :bbbbbbb-eeeeebbbebbbbbeeeeeeeebbbbebbbbbbbbbe: Contact : bbb bbbbb |