#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | M 1 (R) | polymer(polypeptide(L)) [588 aa] | Helicase :R1AB_SARS2 | |
2 | b | J 1 (O) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 158L 204D 205Y (identity: 100.0 %/99.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7egq_M_1 identity=99.5% |
queryA 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 :****************************************************************************************************: 7egq_M_1 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 SecStr : EE TTT EE EESSSSS B HHHHHHHHHSSS EESSSB S SSS GGGEEEETTEEEETTT SS BSEETTEE TTTT S: ExpBur :eeebebbebebbbebbebebebebbbbbbeebbeebebbebbbeeebebebeebeeeebeebebbeebbebeeeeeeeeeebbeeeebebeeeeeeeeee: queryA 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 :****************************************************************************************************: 7egq_M_1 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 SecStr : HHHHHHHHH S SHHHHHHHHTS HHHHHHHHHHHHHHHHHTSS EEEEEE SSSEEEEEE SSS SS EEEEE SSS EEEEEE EE: ExpBur :ebeebbebbebebeebebbeebbebeeebbbbbbebbebbeebeeebebebebeeeeeeeebbbeeeeeeeebeeeeebbbbbebeeeebeeebbbbbbe: Contact : b queryA 202:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 :****************************************************************************************************: 7egq_M_1 202:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 SecStr :E SSTTEEEE SS TTEEEEE S S S SS B SS TT S TTTTTTHHHHHHHHTBSEEE B TTS HHHHHHHHHHHSTT: ExpBur :eeeeeebbebeeeeeeebeeebebebebbeeeebebebebeeeebeebeebeeeeeeeeebeebeebbeebbbbebbbbbbbbbbbbebbbbbbbebbee: Contact : bb queryA 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 :*********************************** **************************************************************: 7egq_M_1 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 SecStr :S EEEEESSHHHHHHHHHHHHHHS GGGEEE --- SSEES SS SEEEEESTT B SEEEE SSS HHHHHHHHHH B SEEEE : ExpBur :bbbbbbbeeeeebeebbebbeeebeeeebbbbeee---eebbeebeeeeeebbbbbbbbeebeeeebebbbbbbbbebbbbbbbbbbeebbbebbbbbbb: queryA 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 :****************************************************************************************************: 7egq_M_1 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 SecStr :TTS TT SS TTTS HHHHHHHTT S B EE SS HHHHHHHHHHTT S EE S S EEEEE EEEETTEEEEHHHHHHHHHHHH: ExpBur :bbbbbbebeeeeeeebebeebbbbbbebeeeeeebebbebebbbbbbbebbbebbbeeebeeeeeebeebbbbebeeeeeeeeebbbbeebbebbeebbe: queryA 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592 :*******************************************************************************************: 7egq_M_1 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592 SecStr :H GGGTTSEEE S HHHHHHHHHHT S EE TTTTTT BSSEEEE STTTT HHHHHHHHTTBSS EEEEE SHHHHH SEE : ExpBur :eeeebeebbbbbbeebbbebbeeebebeeebbeebeeeeeebbbbbbbbeeeebeeebbbbbbbbbbeebbbbbbbbeebbeebebeeeee: |