#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | I 1 (E) | polymer(polypeptide(L)) [596 aa] | Helicase :R1AB_SARS2 | |
2 | b | G 1 (L) | polymer(polyribonucleotide) | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | 177N 179N 230H 309C 310S 311H 337R 359T 361N 362A 390R 408P 409R 410T 484V 485S 486S 515Y 532T 534D (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cxn_I_1 identity=100.0% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :****************************************************************************************************: 7cxn_I_1 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 SecStr : EE TTT EE B TTSTT B HHHHHHHHHTSS BSSSB S STT GGG EE SSSEE STT SS EESEETTEE TTTTT : ExpBur :eeeebbbbebebbbebeebeeebebbbebbeebbeebebeebbbeeebebebeebeeeebeebeebeebbebeeeeeeebeebbeeebbebeeeeebebe: queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 :****************************************************************************************************: 7cxn_I_1 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 SecStr :S HHHHHHHHH S BHHHHHHHTTS HHHHHHHHHHHHHHHHHHHTTS EEEEEE SSS EEEEE TTS TT EEEEEESSS EEEEEEE : ExpBur :eebeebbebbebebeebebbeebbebeeebbbbbbbbeebbeeeeeeebbebebeeeeeeeebbbeeeeeeeebeeeeebebbbbeeeeeeeeebbebbb: Contact : b b queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 :****************************************************************************************************: 7cxn_I_1 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 SecStr :EE SSSS EE BSS SSEEEEE S SS B SS S SS GGG TTHHHHHHHHHBSEEEEE STTSHHHHHHHHHHHHST: ExpBur :ebbeeeebbebeeeeeeebeeebebebeeeebeeeebebbeeeeeeeeeeebeeeeeebeebeebeeebeebbebbbbbbbbbbebbbeebbbbbbebbe: Contact : b queryA 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 :****************************************************************************************************: 7cxn_I_1 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 SecStr :T EEEEES HHHHHHHHHHHHHHS S B SS SS SS SS SSEEEEEGGG S SEEEE GGG HHHHHHHHHH SEEEEEE: ExpBur :ebbbbbbbeeeebbbbbbeebeeebeeebbbbbbeeebeeebbeeeeeeeeebebbbbbbeebeeeebebbbbbbbbbbebbbbbbbbeebebebbbbbb: Contact : bbb b b bb b queryA 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 :****************************************************************************************************: 7cxn_I_1 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 SecStr : TTS TT BS GGGSSHHHHHHHTT SSB SSS HHHHHHHHTTTS S EE SSSS HHHHHHHHHHH: ExpBur :bbbbbebeeeebeeeebeeeebbbbbeebeeeeeebebeebebbbbbbbebbbeeebeeeeebeeeeeebbbbebebeeeeeebeebbbeebbbbeebee: Contact : bbb bbb queryA 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRN: 596 :************************************************************************************************: 7cxn_I_1 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRN: 596 SecStr :SS SSTTS EEEESSHHHHHHHHHS SS EEETTT SS BS EEEE SS TTTT HHHHHHHHTTBSS EEEE SSGGGT S TT : ExpBur :eebeebeebbbbbbeeebbbbbeeeebbebebbebbbebbeeebbbbbbeeeeebeeeebbbbbbbbbeebbbbbbbbeebeeebebeeeeeeeee: Contact : b b b |