#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | H 1 (E) | polymer(polypeptide(L)) [586 aa] | Helicase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 45V 46N 65L 67G 79I 80S 81F 90F 92L 93Y (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwo_H_1 identity=98.8% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :****************************************************************************************************: 8gwo_H_1 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 SecStr : EE TTT EE EETTSSS B HHHHHHHHHSSS EESSSB S STT STTEEEETTEEEETTT SS BSSBTTB S TTS : ExpBur :eebebbbbebebbbebeebeeebebbbbbbeebbeebebeebebeeebebebeebebebbeebebbeeebebeeeeeeeeeebeeeeebebeeeeeeebe: Contact : bb b b bbb b bb queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 :****************************************************************************************************: 8gwo_H_1 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 SecStr :S HHHHHHHH S SHHHHHHHHSS HHHHHHHHHHHHHHHHHHHTSS EEEEEETTEEEE SS SSTTS B EESSSSEE B E: ExpBur :eebeebbebbeeebeebebbeebbeeeeebbbbbbbbbebbbeeebeebbebbbeeeeeeebbebeeeeeeeebebbeebebebebeeeeeeeebbebbb: queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 :*** *********************************************************************************************: 8gwo_H_1 201:EKGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 SecStr :EE ---- EEE SS TTB S SS SS SS S S TTTHHHHHHHTTSSEEEEE TTSSGGGHHHHHHHHST: ExpBur :bee----ebebeeeeeeebeeebbbebeeeebeebeeebeeeeeebeebeebeeeeeeeeebeebbebbeebbebbbbbbbbbbbbebbebbbbbbebbe: queryA 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 :************************************ *************************************************************: 8gwo_H_1 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 SecStr :TS EEEEESSSSTTHHHHHGGGTTS STTEEE --- SS SS S SEEEEETTS EE SEEEEE TT HHHHHHHHHHEE SEEEEEE: ExpBur :ebbbbbbbbebeebeebbeebbeebeeebbbbbbee---eebeeebeeeeeeeebbbbbbeebeebebbbbbbbbbbbbbbbbbbbbbeebebebbbbbb: queryA 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 :****************************************************************************************************: 8gwo_H_1 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 SecStr : SSS S TT SS GGGSSHHHHHTTTT SEE TTS HHHHHHHHHHTSTT S B EESSSSEE HHHHTHHHHHH: ExpBur :bbbbeebebebeeeeebeeeebbbbbebbeeeeeebebbebebbbeebbebbbeeebeebbeebeeeeeebebbebeeeeeeeeebbebeebbebbeebb: queryA 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 :*********************************************************************************************: 8gwo_H_1 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :TT TTSSSS EE SSHHHHHHHHTTS EE SSS TT SEEEE STTTSSSSTTHHHHTTSSSEEB SSSS TT B : ExpBur :eeeeebeebbbbbbbbbbbeebeeeeebeebbbeebeeeeeeebbbbbbbeeeebbbebbbbbbbbbbebbbbbbbbbeeebeebeeeeeeee: |