#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | G 1 (F) | polymer(polypeptide(L)) [585 aa] | Helicase :R1AB_SARS2 | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | 93Y 95N 96T (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwo_G_1 identity=98.8% |
queryA 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 :****************************************************************************************************: 8gwo_G_1 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 SecStr : EE TTT EE EEETTSSS EE HHHHHHHHHSSS EESSS S STT GGGEEE SSSEEETTT SS BSEETTEE SSSSS S: ExpBur :eeebeebebebbbebbebeeebebbbbbbeebbeebebeebebeeebebebeeeeeeebeebebeeeeeebeeeeeeeeeebeeeeebebeebeebeeee: Contact : b bb queryA 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 :****************************************************************************************************: 8gwo_G_1 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 SecStr : HHHHHHHT S SHHHHHHHTSS HHHHHHHHHHHHHHHHHHHTSS EEEEE STT EEEE SS STTS EEEEEESSS EEEEEEE EE: ExpBur :ebeebbebbebebeebebbeebbeeeeebbebbbbbbebbebebeeebbebbbeeeeeebebebebeeeeeebeeeeebebbbebeeeeeeeebbbbebb: queryA 202:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 :** **********************************************************************************************: 8gwo_G_1 202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 SecStr :E ---- EEE SS SSB B S SS SS TT S TT SSSHHHHHTTTT S B B TTSSHHHHHHHHHHH SS: ExpBur :ee----ebebbeeeeeebeeebebbbeeeebeebebebebeeeeeeebeeeeebeeebeebebbeebbeebbebbbbbbbbbbebbbeebbbbbbebbee: queryA 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 :*********************************** **************************************************************: 8gwo_G_1 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 SecStr : EEEEBSSHHHHHHHHHHHHHHS TTTEEE --- SS S SEEE BTTS SEEEETTSSSS HHHHHHHHHH SEEEE : ExpBur :bebbbbbbebebbeebbeebbeebeeeebbbbbee---eeeeeebeeeeeebbbbbbbbeebeeeebebbbbbbbbbbebbbbbbbbebbebebbbbbbb: queryA 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 :****************************************************************************************************: 8gwo_G_1 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 SecStr :TTS SS S GGGGSHHHHHHHHS S B SSS TTTHHHHHHHTTTT S S EEE EE SS EE HHHHHHHHHHHH: ExpBur :bbbbeeeebeeeeeebeeeebbbbbebbeeeeebbebbbbebbbebbbebbbeeebeeebeeeeeeeeebebbeeeeeeeeeeebbebeebbbbbeebbe: queryA 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 :********************************************************************************************: 8gwo_G_1 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :HSGGG EE SSHHHHHHHTTTT EE SSS TT SSEEEE STTTSSSSSTHHHHTT SS EEEE SSSTTT B : ExpBur :eeeebeebebbbbbbbbbeebeeebebeebebbebeeeeeeebbbbbbbeeeebbeebbbbbbbbbbebbbbbbbbbeebeeebebeeeeee: |