#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | F 1 (F) | polymer(polypeptide(L)) [585 aa] | Helicase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 45V 46N 65L 70Y 80S 90F 91G 92L 93Y (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwm_F_1 identity=98.8% |
queryA 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 :****************************************************************************************************: 8gwm_F_1 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 SecStr : EE TTT SEE EEESSSSS EE HHHHHHHHHHSS EE SSB STT SSS EE SSSEE GGG SS BSEETTEES SS SS S: ExpBur :ebebeebebebbbebbebeeebebbbbbbeebbeeeebeebbbeeebebebeeeeeeebeebeebeebeebeeeeeeeeeebbeeeebeeeebeebebee: Contact : bb b b b bbbb queryA 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 :****************************************************************************************************: 8gwm_F_1 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 SecStr : HHHHHHHH S SHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHTS EE BTTEE TT SSS EEEE SS EEEEE EEE: ExpBur :ebeebbebbebebeeeebbeebbebeeebbbbbbbbbebbeeeebeeebebbbeeeeeebebebbbeeeeeebeeeeeeebbbebeeeeeeeebeebbbe: queryA 202:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 :** **********************************************************************************************: 8gwm_F_1 202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 SecStr :E ---- EEEE SS SS EE S SS B SS TT SS STTGGGTHHHHHHTTBS BB SSSSTTHHHHHTTTTSTT: ExpBur :ee----ebebeebeeeeeeeebebbbeeeebeebebebbeeeeebeebeebeeeeeeeeebeebeebbebbbebbbbbbbbbbbbbbeebbbbbbebeee: queryA 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 :*********************************** **************************************************************: 8gwm_F_1 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 SecStr :S EEE SSHHHHHHHHTTTTTSS GGGEEE --- S SBSS SSSEEE GGG SEEE TTT HHHHHHHHHH SS B : ExpBur :bbbbbbbbeeebbbebbebbeeebeeeebbbbeee---eeeeeebeeeeeebebbbbbbeebeeeebbbbbbbbbbbbbbbbbbbbbbebebebbbbbbb: queryA 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 :****************************************************************************************************: 8gwm_F_1 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 SecStr :TTS SS SS SS SSSGGGTTTTT B S SS GGGTTGGGGTTTTT SS EE EE SS EE HHHHHHHHHHHH: ExpBur :bbbbbeebeebeeeebebeebbebbebbeeebeebebeebbbbbbbbbeebbebebeeebebeeeeeeebbbbeeebeeeeeeeebebeebbbbbeebbe: queryA 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 :********************************************************************************************: 8gwm_F_1 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :TSGGGTT EEE SSTHHHHHHTTTT B GGG SS SEEEEB S SHHHHSHHHHHHHHTT SSEEEEB SSHHHHHS EE : ExpBur :eeeebeebbbbbebeebbeebeeeeebeeebbeebeebeeebbbbbbbbeeeebbebbbbbbbbbbbeebbbbbbbeeebeeebebeeeeee: |