#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | F 1 (F) | polymer(polypeptide(L)) [590 aa] | Helicase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [186 aa] | Non-structural protein 8 :R1AB_SARS2 | 44S 45V 46N 65L 66G 67G 79I 80S 81F 90F 91G 92L (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7rdz_F_1 identity=100.0% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :****************************************************************************************************: 7rdz_F_1 5:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 104 SecStr : EE TTT EE EE TTSSS EE HHHHHHHHHHSS BSSSB SSS STT EEETTEEE GGG SS BSEETTEES TTTTS : ExpBur :eebebebbebebbbebbebebebbbbbebbeebbeebebeebebeeebebebeeeeeeebeebebbeeebebeeeeeeeeeebbeeebbebeeeeebeee: Contact : bbb bbb bbb bbb queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 :****************************************************************************************************: 7rdz_F_1 105:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 204 SecStr :TTHHHHHHHHH S SHHHHHHHHSS HHHHHHHHHHHHHHHHHHHHS EEE S SSEE EEE TTS SSS EEEE SSS EEB : ExpBur :eebebbbebbebebeebebbeebbebebebbbbbbbbbbbebbeeeeebbebebeeeeeeebbebbbeeeeeebebbeebbbbbebeeeeeeeeebbbbb: queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 :****************************************************************************************************: 7rdz_F_1 205:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 304 SecStr : B SSSS EE B SSS TT EEE S SS SS S SS SSSGGGHHHHHHHTTSSEEEEE SSSSHHHHHHHHHHHST: ExpBur :bbbeeeebbebbeeeeeebeeebebebeeeebeebebebbeeeeebeeeeebeeeeebeeebeebeebbeebbbbbbbbbbbbbebebebbbbbbbebbe: queryA 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 :****************************************************************************************************: 7rdz_F_1 305:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 404 SecStr :TS EEEEESSHHHHHHHHHHHHHHS SSSEEE SS S SSS TT SEEEEETTT SEE SEEEEE TTT HHHHHHHHHHEE SEEEEE : ExpBur :ebbbbbbbbebeebbebbeebeeebeeeebbbbeeeeebeeebeebeeeeeebebbbbbbeebeeeebbbbbbbbbbebbbbbbbbbbeebebebbbbbb: queryA 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 :****************************************************************************************************: 7rdz_F_1 405:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 504 SecStr : TTS TT SS GGGS HHHHHHHHH SEE B SS HHHHHHHHHHTS S BSS SEEB EE SSS HHHHHHHHHSS: ExpBur :bbbbbebebebeeeeebeeebbbbbbeebeeeeeebeeeebebbbbebbeebbeeebeeebebeeeeeeebbbbebebeeeeeeeebbbeebbeebeeeb: queryA 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 590 :******************************************************************************************: 7rdz_F_1 505:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 594 SecStr :SS TTTT EEE SSHHHHHHHHHHS B TTT SS SEEEEE STTTS HHHHHHHHTS SSEEEEEE HHHHTTS B : ExpBur :eebeebeebbbbbbbbbbbbbbeeeeebeebbbeebeeeeeeebbbbbbbeeeebeeebbbbbbbbbbeebbbbbbebeebeeebebeee: |