#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | E 1 (E) | polymer(polypeptide(L)) [590 aa] | Helicase :R1AB_SARS2 | |
2 | b | H 1 (T) | polymer(polyribonucleotide) | Template RNA | 139K 146K 178R 179N 180Y 230H 233M 309C 310S 311H 335P 361N 362A 363L 365E 378M 390R 408P 410T 482H 485S 486S 514P 515Y 516N 532T 534D 535S 552T 554H (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7rdy_E_1 identity=100.0% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :****************************************************************************************************: 7rdy_E_1 5:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 104 SecStr : EE TTT EE EEESSSTT EE HHHHHHHHHHSS EESSSB S SSS TTT EEETTEEE TTS SSEEESSBTTB SS SS : ExpBur :eebebbbeebebbbebbebeeebebbbebbeebbeebebeebbbeeebebebeeeeeeebeebebbeeebebeeeeeeeeeebbeeebbebeeeeebeee: queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 :****************************************************************************************************: 7rdy_E_1 105:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 204 SecStr :SGGGTHHHHHH S SSHHHHHSSSS HHHHHHHHHHHHHHHHHHGGGS EEEEEEEETTEEEEEE TTS STTSEEEEE SSS EEEEEEE: ExpBur :eebeebbebbebebbeeebbeebbebeeebbbbbbbbbebbebeebeebbebebeeeeeeebbbbebeeeeeebebbeebebbbbbeeeeeeeebbebbb: Contact : b b bbb queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 :****************************************************************************************************: 7rdy_E_1 205:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 304 SecStr :EE SSSS EEEEESS SS EEEE S SS SS S SS SSGGGGHHHHHHHHHSSEEEEE TTSSHHHHHHHHHHHST: ExpBur :eebeeeebbebeeeeeeebeeebebebbeeebeebebebbbeeeeeeebeebeeeeeeeeebeebeebbeebbebbbbbbbbbbbbebbbbbbbbbebbe: Contact : b b queryA 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 :****************************************************************************************************: 7rdy_E_1 305:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 404 SecStr :T EEEEESSSHHHHHHHHHHHHHS STT B SS SS SS BS TTSSEEEEEGGG S B SEEEEE STT HHHHHHHHHH B S EEEE : ExpBur :ebbbbbbbbbebbbebbbebbeeebeeeebbbbbeeeebeebbeebeeeeeeeebbbbbbeebeeeebebbbbbbbbbbebbbbbbbbeebebebbbbbb: Contact : bbb b bbb b b b queryA 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 :****************************************************************************************************: 7rdy_E_1 405:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 504 SecStr : TTS TT SS GGGSSHHHHHHHHT SEE BSSS HHHHHHHTTTTSTT BSS S EEEEE B SSS B HHHHHHHHHHH: ExpBur :bbbbbbbebebeeeeebeeeebbbbbebbeeeeeebebeebebbbbbbbebbbeeebeeebebeeeeeeebbbbeeebeeeeeeeebbbeebbebbeebb: Contact : b b b bb queryA 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 590 :******************************************************************************************: 7rdy_E_1 505:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 594 SecStr :HS GGGGG EEEES HHHHHHTTTTT EEETGGGTT EEEEEEE SSSSTT HHHHHHHHTTEEEEEEEEE HHHHHHS B : ExpBur :eeeeebeebbbbbbbebbbebbeeebebeeebbbebbbbeeebbbbbbbbeeeebeeeebbbbbbbbbeebbbbbbbbeebeeebebeee: Contact : bbb b bb b b |