#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | E 1 (E) | polymer(polypeptide(L)) [590 aa] | Helicase :R1AB_SARS2 | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [75 aa] | Non-structural protein 7 :R1AB_SARS2 | 367T 392R (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7rdx_E_1 identity=100.0% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :****************************************************************************************************: 7rdx_E_1 5:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 104 SecStr : EE TTT EE EEESSSTT EE HHHHHHHHHHSS EESSSB SSS TTT EEETTEEE STT SS EESSBTTB SSTTS : ExpBur :eebebbbbebebbbebbebeeebbbbbebbeebbeebebeebebeeebebebeebeeeebeebeebeeebebeeeeeeeeeebbeeebbebeeeeebeee: queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 :****************************************************************************************************: 7rdx_E_1 105:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 204 SecStr :TTHHHHHHHHH S SSSHHHHTTSS HHHHHHHHHHHHHHHHHHTT EE S S SSSB B TTS TTEEEEE SSS S EEB : ExpBur :eebeebbebbebebeebebbeebbebeeebbbbbbbbbbbbbebebeebbebbbeeeeeeebbbbeeeeeeebbeeebebbbbbbbeeeeeeeeebbbbb: queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 :****************************************************************************************************: 7rdx_E_1 205:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 304 SecStr : B SSSS B B SS TT EEEEEEE S SS B SS S SS STTGGGHHHHHHHHTBSEEEEE TTSSHHHHHHHHHHHST: ExpBur :eeeeeeeebebeeeeeeebeebbbbbbebbebeebebebbbeeeeeeeeeebeeeeebeeebeebeeebeebbebbbbbbbbbbbbbbbbbbbbbbebbe: queryA 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 :****************************************************************************************************: 7rdx_E_1 305:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 404 SecStr :TS EEEEESSSHHHHHHHHHHHHHS STT B SS S TTS BT TTSSEEEEEGGG SEEEEEEEEE GGG HHHHHHHHHHEEEEEEEEE : ExpBur :ebbbbbbbbbbbbbebbbebbeeebeeeebbbbeeeeeeeebbeebeeeeeeeebbbbbbeebeebebbbbbbbbbbbbbbbbbbbbbeebebebbbbbb: Contact : b b queryA 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 :****************************************************************************************************: 7rdx_E_1 405:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 504 SecStr : TTS TT SS GGGSSHHHHHHHHH SEE EE SS HHHHHHHHHHTSSS EE S S EEEEE EE SSSEE HHHHHHHHHHH: ExpBur :bbbbbbbebebeeeeebeeebbbbbbebbeeeeeebebebbebbbbbbbebbbebebeeebeeeeeeeeebbbbebebeeeeeeebbbbeebbeebeeeb: queryA 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 590 :******************************************************************************************: 7rdx_E_1 505:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 594 SecStr :SS GGGTT EEE SSHHHHHHHHHHH B TTTTSS EEEEEEE SSSSTT HHHHHHHHTTEEEEEEEEE HHHHHH B : ExpBur :eebeebeebbbbbbbebbbebbeeebebeeeebeebbbbebebbbbbbbbeeeebeeebebbbbbbbbeebbbbbbbbeebeeebebeee: |