#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | E 1 (F) | polymer(polypeptide(L)) [585 aa] | Helicase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 53P 54G 74S 75H (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwb_E_1 identity=98.8% |
queryA 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 :****************************************************************************************************: 8gwb_E_1 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 SecStr : EE TTT EE B TTSSS B HHHHHHHHHHSS B SS SS STT TTTEEE SSSEEEGGG SS EESEETTEESSTTSSS S: ExpBur :eeebbbbebebbbebeebeeebbbbbbbbeebbeebebeebbbeeebebebeebebebbeebeebeeebebeeeeeeeeeebbeeeebebeebeeeebee: Contact : bb bb queryA 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 :****************************************************************************************************: 8gwb_E_1 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 SecStr : HHHHHHHT S BHHHHHHHHSS HHHHHHHHHHHHHHHHHHHTSS STT SS STTS BSSS B : ExpBur :ebeebbebbeeebeeeebeeebbeeeeebbbbbbbbbebbbeeebeeeeebeeeeeeeebeeeeeeeeebeeeeeebebebebebeeeeeeeebeebebe: queryA 202:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 :** **********************************************************************************************: 8gwb_E_1 202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 SecStr :B ---- B SS SS S SS SS S S SS SSSHHHHHHHTTSS TTSSHHHHHHHHHHH TT: ExpBur :ee----ebeeeeeeeeeeeeebebebeeeebeebebebebeeeeeeeeeeeeeeeeeeeebeebeeebeebeebbbbbbbbbbebbbbbbbbbbbebbee: queryA 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 :*********************************** **************************************************************: 8gwb_E_1 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 SecStr :S EEE S HHHHHHHHHHHHHHS TTTEEE --- SB S SEEE BTTB SEEESEEE TT SSS HHHHHHHHHHEEESS : ExpBur :bebbebbeeeebbebebeeeeeebeeeebbbeeee---eeeeeebeeeeeeeebbbbbeeebeeeebebbbbebbbebebbebbebbeebeeeebbbbbb: queryA 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 :****************************************************************************************************: 8gwb_E_1 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 SecStr :TTS SS B GGGS HHHHHHTTS S SS HHHHHHHHHHTSTT S S B BSSSSB HHHHHHHHHHHH: ExpBur :bbbbeeeeeeeeeeebeeeebbebbeebeeeeeebeeeeeebbebbbbebbbeebbeeeebeeeeeeeebebbeeeeeeeeeeeeeebeebeeeeeeebe: queryA 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 :********************************************************************************************: 8gwb_E_1 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :H GGG S B SSHHHHHHHTTTT B STT TT S TTTS SSSTHHHHTT SS SSSHHHHH B : ExpBur :eeeeeeebebbbeebbbbeebeeeeeeebeebeebbeeeeeeeebbbebeeeebbeebbbbbbbbbbeeebbbbbbbeebeeebebeeeeee: |