#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(queryA) | B 1 (A) | polymer(polypeptide(L)) [572 aa] | Helicase :R1AB_SARS2 |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5rm4_B_1 identity=96.6% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :********************************************************************************************** : 5rm4_B_1 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKXXXXXX: 100 SecStr : EE TTT EES EESSSSS B HHHHHHHHTTSS EESSS S STT GGGEEEETTEEEETTT SS EESEETTEE TT ------: ExpBur :eebebebeeeebbbebbebeeebebbbebbeebbeebebeebbbeeebebebeebeeeebeebeebeebbebeeeeeeebeebbeeeebebeee------: queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 : *********************************************************************************** *******: 5rm4_B_1 101:XXVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYXXXXXXXXQIGEYTF: 200 SecStr :-- HHHHHHHH S BHHHHHHTTTS HHHHHHHHHHHHHHHHHHHTTS EEEEEE SSS EEEEE TTS SSS EEE -------- EEEE: ExpBur :--eeebbebbebebbebebbebbbebeeebbbbbbbbbebebbeeeeeebebebeeeeeeeebebeeeeeeeebeebeeeebbbe--------ebeebeb: queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 :** **********************************************************************************************: 5rm4_B_1 201:EKXXXXDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 SecStr :E ---- EEEEEESS SS EEEE S SS B SS S S GGGGGGHHHHHHHHTBSEEEEE TTSSHHHHHHHHHHHST: ExpBur :ee----eebebbeeeeeebeeebebebeeeebeebebebbbeeeeeeeeeebeeeeebeeebeebeeebeebbebbbbbbbbbbebebeebbbbbbebbe: queryA 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 :****************************************************************************************************: 5rm4_B_1 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 SecStr :TS EEEEESSHHHHHHHHHHHHHHS GGGEEEE SS S SSEES TTSSEEEEEGGG SEEEEEEEE SGGG HHHHHHHHHHEEEEEEEEEE: ExpBur :ebbbbbbbeebebbeebbeebeebbeeeebbbbbeeeeeeebbeebeeeeeeebbbbbbbebbeebebebbbbbbbbebbbbbbbbbbeebebebbbbbb: queryA 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 :****************************************************************************************************: 5rm4_B_1 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 SecStr : TTS TT BS GGGS HHHHHHHHT SEE EESSS HHHHHHHHHHHSTT EE S S EEEEE EEETTEEE HHHHHHHHHHH: ExpBur :bbbbbebebebbeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbeebbeeebeeeeeeeeebbbbeeeeeeeeeeeebbbeebbbbbeebb: queryA 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592 :********************************************************************************************: 5rm4_B_1 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592 SecStr :HH GGGGG EEEES HHHHHHHHHHH EEETTTTTT EEEEEEE S STTTS HHHHHHHHTTEEEEEEEEES HHHHHH SEE : ExpBur :eeeeebeebbbbbbbbbbbebbeeebebeeebbeebbeeeeebbbbbbbbeeeebbeebbbbbbbbbbeebbbbbbbbeebbeebebeeeee: |