#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | B 1 (A) | polymer(polypeptide(L)) [515 aa] | ORF1ab :K0BWD0_9BETC | |
2 | b | G 1 (A) | non-polymer(ZN) | ZINC ION | 5C 8C 26C 29C (identity: 100.0 %/72.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5wwp_B_1 identity=72.6% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :*** ** * ******** ***************** * ** **** ********* * *** ******** * * * ******** ******* * **: 5wwp_B_1 3:AVGSCVVCHSQTSLRCGTCIRRPFLCCKCCYDHVIATPHKMVLSVSPYVCNAPGCGVSDVTKLYLGGMSYFCVDHRPVCSFPLCANGLVFGLYKNMCTGS: 102 SecStr : EE TTT EESEEETTSTT EE HHHHHHHHSSSS EESSSBS SSS TTT EEETTEEE SSS SS EESEETTEES TTTTT : ExpBur :eebebebbebebbbebeebeeebebbbebbebbbeebeeeebbbeeebebebeeeeeebbeebebbeeeebbeeeeeeebeebbeeeebebeeeeebebe: Contact : b b b b queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 : ** ****** *** **** ** ********* **** * : 5wwp_B_1 103:PSIVEFNRLATCDWTESGDYTLANTTTEPLKLFAAETLRATEEASK------------------------------------------------------: 148 SecStr :TTHHHHHHHHH TTBHHHHHHTTTS HHHHHHHHHHHHHHHHHH ------------------------------------------------------: ExpBur :ebbeebbebbebebbeeebbebbbebeeebbbbbbbbbebeeeeee------------------------------------------------------: queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSH----------------------------------------------------------------------: 230 : : 5wwp_B_1 149:------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 218 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 231:--------------TVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDA: 316 : * * *** * ** ** ******* ** * *** ** * ** * **************** *** ** ************: 5wwp_B_1 219:XXXXXXXXXXXXXXSVATLTAPTIVNQERYVKITGLYPTITVPEEFASHVANFQKSGYSKYVTVQGPPGTGKSHFAIGLAIYYPTARVVYTACSHAAVDA: 318 SecStr :-------------- S SS B SS S S TTTGGGHHHHHHTTSBSEEEEE TTS HHHHHHHHHHHSTT EEEEESSHHHHHH: ExpBur :--------------ebeebebebbeeeeeeeeeeebeeeeebeeebeebeebbeebbebbbbbbbbbbebebbebbbbbbbbbeebbbbbbbeeeebbbe: queryA 317:LCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGDPAQLPAPRTLLTKGT: 416 :***** *** * ******** ***** * **** * ** * * ****** *** * ** ** ****** *** *** ** ************** **: 5wwp_B_1 319:LCEKAFKYLNIAKCSRIIPAKARVECYDRFKVNETNSQYLFSTINALPETSADILVVDEVSMCTNYDLSIINARIKAKHIVYVGDPAQLPAPRTLLTRGT: 418 SecStr :HHHHHHHHS GGGEEEE SS SS SSEES TTSSEEEEESTT SEEESEEEE SGGG HHHHHHHHHHEEES EEEEE TTS TT BS : ExpBur :bbeebeeebeeeebbbbbeeeeeeebbeebeeeeeebebbbbbbebbbebebebbbbbbbbebbbbbbbbbbeebebebbbbbbbbbbbebebeebeeee: queryA 417:LEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYN: 516 :**** **** *** *** ** * *** *** ******* *** * * * **** *** *** ******** * * * **** *********: 5wwp_B_1 419:LEPENFNSVTRLMCNLGPDIFLSMCYRCPKEIVSTVSALVYNNKLLAKKELSGQCFKILYKGNVTHDASSAINRPQLTFVKNFITANPAWSKAVFISPYN: 518 SecStr : GGGSSHHHHHHHHH SEE EESSS HHHHHHHHHHTSTT EESS S EEEEE EESSSSEE HHHHHHHHHHHHH GGGGG EEEES H: ExpBur :beeebbbbbbeebeeeeeebbbeebebbbebbbebbbeeebeeebebeeeeeeebbbbeeeeeeeeeeebbbbeebbebbeebbebbeebeebbbbbbbe: queryA 517:SQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592 :***** *** ************ **** ** *** * ********** **** * * * ** * : 5wwp_B_1 519:SQNAVSRSMLGLTTQTVDSSQGSEYQYVIFCQTADTAHANNINRFNVAITRAQKGILCVMTSQALFESLEFTELSF: 594 SecStr :HHHHHHHHHT EEEEHHHHTT EEEEEEE SSTTTT HHHHHHHHTTEEEEEEEEES HHHHHT SEE S: ExpBur :bbbebbeeebebebebbeebbeeebebbbbbbbbeeeebeeebbbbbbbbbbbebbbbbbbbeebbeebebeebee: |