#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [572 aa] | Helicase :R1AB_SARS2 | |
2 | b | C 1 (A) | non-polymer(NY7) | N-(2-methoxy-5-methylphenyl)glycinamide | 467K 473K 583D 584K 585L 586Q 587F (identity: 100.0 %/96.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5rlf_A_1 identity=96.6% |
queryA 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 :********************************************************************************************** : 5rlf_A_1 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKXXXXXX: 100 SecStr : B TTT BS EESSSTT B HHHHHHHHTTSS EESSS SS STT GGGEEEETTEEEETTT SS EESEETTEE TT ------: ExpBur :eebebbeeeeebbbebbebeeebebbbebbeebbeebebeebbbeeebebebeebeeeebeebebbeebbebeeeeeeebeebbeeeebebeee------: queryA 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 : *********************************************************************************** *******: 5rlf_A_1 101:XXVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYXXXXXXXXQIGEYTF: 200 SecStr :-- HHHHHHHH S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHTS EEEEEE SSSEEEEEE SSS STTS EEE -------- EEEE: ExpBur :--eeebbebbebebbebebbebbbebeeebbbbbbbbbebbbbeeeeebbebebeeeeeeeebeeeeeeeeeebeebeebebbbe--------ebbebbb: queryA 201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 :** **********************************************************************************************: 5rlf_A_1 201:EKXXXXDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 SecStr :E ---- EEEEESS TT EEEE S SS B SS S S GGGGGGHHHHHHHHTBSEEEEE TTSSHHHHHHHHHHHST: ExpBur :ee----eebebbeeeeeebeeeeebebeeeebeebebebbbeeeeeeeeeebeeeeebeeebeebeeebeebbebbbbbbbbbbebebebbbbbbbebbe: queryA 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 :****************************************************************************************************: 5rlf_A_1 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 SecStr :T EEEEESSHHHHHHHHHHHHHHS GGGEEEE SS S SSEET TTSSEEEEEGGG SEEEEEEEE GGG HHHHHHHHHHEEEEEEEEEE: ExpBur :ebbbbbbbeebebbeebbeebeeebeeeebbbbeeeeeeeebbeebeeeeeeeebbbbbbebbeeeebebbbbbebbebebbbbbbbbeebebebbbbbb: queryA 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 :****************************************************************************************************: 5rlf_A_1 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 SecStr : TTS TT BS GGGS HHHHHHHHT SEE EE SS HHHHHHHHHHHSTT EESS S EEEEE EEETTEEE HHHHHHHHHHH: ExpBur :bbbbbbbebebbeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeeebbbeebbbbbeebb: Contact : b b queryA 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592 :********************************************************************************************: 5rlf_A_1 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592 SecStr :HH GGGGG EEEES HHHHHHHHHHH EEEHHHHTT EEEEEEE SHHHH HHHHHHHHTTEEEEEEEEES HHHHHH SEE : ExpBur :eeeeebeebbbbbbbbbbbebbeeebebeeebbeebbeeebebbbbbbbbeeeebbeebbbbbbbbbbeebbbbbbbbeebbeebebeeeee: Contact : bbbbb |