Protein Model on 5d4c_L_1_HA_1 (TEMPLATE: 5d4c )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query F)
1 a FL 1 (N) polymer(polypeptide(L)) [1486 aa] DNA-directed RNA polymerase subunit beta' :RPOC_THET8
2 b HA 1 (N) non-polymer(CTP) CYTIDINE-5'-TRIPHOSPHATE 739D 1029R
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:5d4c_L_1
5d4c_L_1       1:XXKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAA: 100
SecStr          :--     EE     HHHHHHH SSB  SS  B TTT  B TTSTT HHHH  SSTT  SSSS  STTSSS B TTT  B S TTHHHH  EEEEEEEEEE:    
ExpBur          :--eeeeeeeeebebbeebeeebeeebeeeeeeeeeeeebeebbbbbbebbbbeeebebeebebeeeeeeeeebeebebebbeeebbeebebbbebebbbb:    

5d4c_L_1     101:HIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLD: 200
SecStr          : GGGTSSSS HHHHHTT  HHHHHHHHTTSSEEEEE SS EETTEE  TT EE HHHHHHHHH  EEEEE  TT   SS TT EE TT EEETTEE SS :    
ExpBur          :ebbbbebeebbbbbbbebeeeebeebbbbeebbbbebeebebeeeebeeeeebbeeebeebbebeeeebebeeeeebebebeeebeeeeebbeebebebe:    

5d4c_L_1     201:GVALYRFPRRVRVEYVKKERAGLRLPLAAWVEKEAYKPGEILAELPEPYLFRAEEEGVVELKELEEGAFLVLRREDEPVATYFLPVGMTPLVVHGEIVEK: 300
SecStr          :EEEEEEEEEEEEEEEEEEEEEEEEEETTTB   SSB TT EEEE SS EEEE SS EEEEEEE SSSEEEEEESSSSEEEEEEE EEEEE   TT EE T:    
ExpBur          :bbbbbeeeebbebbbeeeeebbbbbeeebbeeeeebeeeeebbebeeebebebeeebebebeebeeebbbbbeeeeeeebebbbbeebeeebeeeeebee:    

5d4c_L_1     301:GQPLAEAKGLLRMPRQVRAAQVEAEEEGETVYLTLFLEWTEPKDYRVQPHMNVVVPEGARVEAGDKIVAAIDPEEEVIAEAEGVVHLHEPASILVVKARV: 400
SecStr          :T EEEEEEEEEE  SS EEEEEEEEEETTEEEEEEEEEEEEEEEEE  TT EE S TT EE TT BSEE SSTTTS B SSSEEEEEEEEEEEEEE EEE:    
ExpBur          :eeebbebeeebebbeebebeebeeeeeeeebbbbbebebeeeeebebeeebebebeeeeebeeeeebbbeeeeeeebebeeebebebbbbebbbbbebee:    

5d4c_L_1     401:YPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPSRARRAKARKRLEVVR: 500
SecStr          :EE SS BS  TT EE TT EEEGGGTEE SS EEEEEETTTTEEEEEE    EEE HHHHHHHHHHH  HHHHHHHHHHHTT S HHHHHHHHHHHHHHH:    
ExpBur          :bebeeeeebeeeeebeeeeebbbeeebebebebebebbeeeebbbbbebeebebebbbebbbebbeebebeebbeebeeebeeeeeeebbebbebbebbb:    

5d4c_L_1     501:AFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPL: 600
SecStr          :HHHHHT  GGGGEEEEEEE  GGGS EEE TTS EEE HHHHHHHHHHHHHHHHHHHHHTT  HHHHHHHHHHHHHHHHHHHSTTSSSS  B TT  SB :    
ExpBur          :bbeeeebebbebbbebbebebbeebeeeeeeeeeeeeebbbbbbeebbebbeebeebeeeeeeeeebbebeebbbebbbbbbbbeeeeeebeeeeeeeeb:    

5d4c_L_1     601:RSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVV: 700
SecStr          :  HHHHHSSTTSHHHHHTSS   SSEEEEEEEE SS  TTEEEEEHHHHHHHTHHHHHHHHHHSTT SSHHHHHHHHHSGGG  THHHHHHHHHSTT  E:    
ExpBur          :ebebebeeeeebebeeeeeeeeeeeeeebebeebeebebebbbbbbebbbebbbeebbeebeeeebbeeeebbeebbeeeeebeeebbebbeebbeeebb:    

5d4c_L_1     701:LLNRAPTLHRLGIQAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKK: 800
SecStr          :EEE SS  SGGGEEEEEEEEESSSSEEE GGGHHHHT  TTT EEEEE   SHHHHHHHHHTSBGGG  B TTTSSBSS   THHHHHHHHHH     SS:    
ExpBur          :bbbbeeeebebbebbbebebbeeeebebbbbbbebbebeeeebebbbebbeeeebbeebeeeebbbebbbbbbebebbbbbeeebbbbbbebbbeeeeee:    
Contact         :                                      b                                                             

5d4c_L_1     801:GAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRILFARIVAEAVEDEKVAWELI: 900
SecStr          :S S EESSHHHHHHHHHHTSS SS EEEETTEEEEHHHHH EESSHHHHHHHHHTTSS TTS EEEEETTEEEEE HHHHHHHHHHHHHHT HHHHHHHS:    
ExpBur          :beeeebeeeeebeebeeeeebbbbbebebeeeebbbbeeeeebeebeebbebeeeeebebbbbbbbebeeeebebbbbbbbbbebbbebbeeeebbbebb:    

5d4c_L_1     901:QLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEKKQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETT:1000
SecStr          : SSS   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT    STTS   THHHHHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHH:    
ExpBur          :ebeebbeeebbbebbbebbeebeeeebbebbbbbbeebeebbeebeeeeeeeebbebeebeeebeebeeebeebeeeeeeeebeeeebbeebbebbeebb:    

5d4c_L_1    1001:EKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCGLRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVD:1100
SecStr          :HHHHHHHHHHHHHH TT HHHHHHHHSSS  HHHHHHHHS  B  B TTSSB SS B   TTT   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebbebbbebbeeeeeebbbbbbbebebeeeeeebbeebbbbbebeeeeeebbeebbebbeeeeeeeebeebbeeeeeeeeeeeeebeeebeebeebbeb:    
Contact         :                            b                                                                       

5d4c_L_1    1101:VTHEIVVREADCGTTNYISVPLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGV:1200
SecStr          :HHTT EEEES       EEEESEEE TT SSEEE  HHHHHHHHTT BBSS EEETTEEE TT B  HHHHHHHHHHHHTTS SEEEE  TTT   TTEE:    
ExpBur          :bbbbbbbeeeebebeeebebebeeeeeeeeeeeebeeebbbbbbbbbbbbeebebeeeebeeeebbebebbebbbebbeeeebeebbbbbbbbbebebbb:    

5d4c_L_1    1201:CQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTXXXXXXXXXXXXXXITQGLPRVIELFEARRPKAKAVISEIDGVVRIEETEEKLSVFVESEGFS:1300
SecStr          :EHHHH EETTTTEE  TT  HHHHHHHHHHGGGGG  --------------   HHHHHHHHHTT   SSB  B SS EEEEEEE SS EEEEEE SS E:    
ExpBur          :bbebbbbbbbebeebebbbbbbebbbebbbebbeebe--------------eeebbebbbbbbbbeebeeebebbeeebebeeeeeeeebbbbbeeeeee:    

5d4c_L_1    1301:KEYKLPKEARLLVKDGDYVEAGQPLTRGAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDV:1400
SecStr          :EEEE  TT  BS  TT EE TT B BSSB  HHHHHHHH HHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHT EEEEEE TTSS  TT EEEHHHH:    
ExpBur          :eebebeeeeeeebeeeeebebbeebbeebbbbeebbeeeeeebbbebbbebbbebbeeeebebbbbbbbbbbbbbbbbbebeeeeebebbebeebbeeeb:    

5d4c_L_1    1401:EALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARK:1500
SecStr          :HHHHHHHHTTT    EEEE    HHHHHHT S HHHHHTTS HHHHHHHHHHHT EE   SHHHHHHTT   SSGGG TTTTT     HHHHHHHHHHHH:    
ExpBur          :eebbeebeeeeeeebeeeebbbbbbebbeebebbbbbbbbeebeebbbebbbeeeebebebbbbbebeeeeeebeebbeeeeeeeeeeeeeeeeeeeeee:    

5d4c_L_1    1501:EA--------------------------------------------------------------------------------------------------:1502
SecStr          :T-:    
ExpBur          :e-:

Input Residue Numbers for Focused Sites

ex) 2,15,123