[pdbjlvh2]Protein Model on 8jks_H_1_E

Protein Model on 8jks_H_1_E_1 (TEMPLATE: 8jks )

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[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IRF5_HUMAN)	H 1 (H)	polymer(polypeptide(L)) [109 aa]	Interferon regulatory factor 4 :F2Z3D5_HUMAN
2	b		E 1 (E)	polymer(polydeoxyribonucleotide) [19 base]	GAGA-Forward	47W 48R(K) 49H 50A 84A(P) 87K 91R 92C 96K (identity: 77.8 %/45.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8jks_H_1 identity=45.3%

queryA        16:RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPY: 115
                : *  **  *  *  **** * * **  * *** **         *   *****   **  ** *  **  **  ******** **             **:
8jks_H_1       4:KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPY: 103
SecStr          : HHHHHHHHHHTTTSTT  BSSTTS EEEEE   SSSS   HHHHTHHHHHHHHHSSS  TTTS   HHHHHHHHHHHHHH TTEEE GGG   SSSS E:    
ExpBur          :ebeebbbebbeeeebeebeeebeeeebbebbbbeeeeeebeeeebbebbbbbbeeeeebeeeeeeeebeebbeebeeebeebeebeebeeebeeeeeebb:    
Contact         :                               bbbb                                 b  b   bb   b                   

queryA       116:KIYEVC: 121
                :* *   :
8jks_H_1     104:KVYRIV: 109
SecStr          :EEEEE :    
ExpBur          :bbbebe:

Protein Model on 8jks_H_1_E_1 (TEMPLATE: 8jks )

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